RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 MT-CO3P00414 261 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 C1RP00736 705 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 CSTBP04080 98 aaKnown RBP4.82□□□□□ -1.64
FCF1-208ENST00000556814 ITGA5P08648 1049 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 TMIGD3P0DMS9 266 aaPredicted RBP4.82□□□□□ -1.64
FCF1-208ENST00000556814 PTH2RP49190 550 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 COPB1P53618 953 aaKnown RBP4.82□□□□□ -1.64
FCF1-208ENST00000556814 DEUP1Q05D60 604 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 BFSP2Q13515 415 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 P3H1Q32P28 736 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 CERKLQ49MI3 558 aaPredicted RBP4.82□□□□□ -1.64
FCF1-208ENST00000556814 CCDC38Q502W7 563 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 PTF1AQ7RTS3 328 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 BCDIN3DQ7Z5W3 292 aaKnown RBP4.82□□□□□ -1.64
FCF1-208ENST00000556814 CERS3Q8IU89 383 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 GALNT4Q8N4A0 578 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 ADAMTS18Q8TE60 1221 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 RSC1A1Q92681 617 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 REPS1Q96D71 796 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 EID2BQ96D98 161 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 CCDC17Q96LX7 622 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 HS6ST2Q96MM7 605 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 RMDN3Q96TC7 470 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 ARPC5LQ9BPX5 153 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 USP29Q9HBJ7 922 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 LPAR3Q9UBY5 353 aa4.82□□□□□ -1.64
FCF1-208ENST00000556814 LOC102724159A0A0B4J2E5 919 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 AQP12BA6NM10 295 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 LGALS16A8MUM7 142 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 PCDH17O14917 1159 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 ASNA1O43681 348 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 GCATO75600 419 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 USP1O94782 785 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 ANXA6P08133 673 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 ITGA2BP08514 1039 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 CHRM5P08912 532 aaPredicted RBP4.81□□□□□ -1.64
FCF1-208ENST00000556814 APEHP13798 732 aaKnown RBP4.81□□□□□ -1.64
FCF1-208ENST00000556814 PDIA3P30101 505 aaKnown RBP4.81□□□□□ -1.64
FCF1-208ENST00000556814 RENBPP51606 427 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 NHLH1Q02575 133 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 TRIM14Q14142 442 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 PWP2Q15269 919 aaKnown RBP4.81□□□□□ -1.64
FCF1-208ENST00000556814 GRAMD1BQ3KR37 738 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 FAM83BQ5T0W9 1011 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 FAM90A2PQ658T7 463 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 GRHL2Q6ISB3 625 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 CCDC144NLQ6NUI1 221 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 TMEM65Q6PI78 240 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 VSTM1Q6UX27 236 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 LINC01465Q8N7H1 131 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 MACROD1Q9BQ69 325 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 TP63Q9H3D4 680 aaPredicted RBP4.81□□□□□ -1.64
FCF1-208ENST00000556814 R3HDMLQ9H3Y0 253 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 PRDM13Q9H4Q3 707 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 EPS8L2Q9H6S3 715 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 FBXO28Q9NVF7 368 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 ASAP1Q9ULH1 1129 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 MAFFQ9ULX9 164 aa4.81□□□□□ -1.64
FCF1-208ENST00000556814 COL11A2P13942 1736 aaPredicted RBP4.8□□□□□ -1.64
FCF1-208ENST00000556814 LRRC3CA6NJW4 275 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 H3BNC9 293 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 IFRD1O00458 451 aaPredicted RBP4.8□□□□□ -1.64
FCF1-208ENST00000556814 DHHO43323 396 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 CA12O43570 354 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 TCEA3O75764 348 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 MATN1P21941 496 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 SERPINF1P36955 418 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 GPC5P78333 572 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 FOXO1Q12778 655 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 CBFBQ13951 182 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 FAM187BQ17R55 369 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 ATPAF1Q5TC12 328 aaPredicted RBP4.8□□□□□ -1.64
FCF1-208ENST00000556814 RINT1Q6NUQ1 792 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 DCDC5Q6ZRR9 648 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 RINLQ6ZS11 566 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 PIK3AP1Q6ZUJ8 805 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 KRT27Q7Z3Y8 459 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 ATG16L2Q8NAA4 619 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 MAFAQ8NHW3 353 aaPredicted RBP4.8□□□□□ -1.64
FCF1-208ENST00000556814 HASPINQ8TF76 798 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 STYXQ8WUJ0 223 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 EDC3Q96F86 508 aaKnown RBP4.8□□□□□ -1.64
FCF1-208ENST00000556814 CRAMP1Q96RY5 1269 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 KATNAL1Q9BW62 490 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 DACT1Q9NYF0 836 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 LRFN1Q9P244 771 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 SERGEFQ9UGK8 458 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 HERC5Q9UII4 1024 aaKnown RBP4.8□□□□□ -1.64
FCF1-208ENST00000556814 FZD4Q9ULV1 537 aa4.8□□□□□ -1.64
FCF1-208ENST00000556814 UBE2J1Q9Y385 318 aaPredicted RBP4.8□□□□□ -1.64
FCF1-208ENST00000556814 AOX1Q06278 1338 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 KAT6AQ92794 2004 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 POLR2AP24928 1970 aaKnown RBP4.79□□□□□ -1.64
FCF1-208ENST00000556814 TTC34A8MYJ7 566 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 SMIM22K7EJ46 135 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 CTIFO43310 598 aaKnown RBP4.79□□□□□ -1.64
FCF1-208ENST00000556814 TAF5LO75529 589 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 EIF3JO75822 258 aaKnown RBP4.79□□□□□ -1.64
FCF1-208ENST00000556814 DUSP1P28562 367 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 IGHMBP2P38935 993 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms