RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 COG7P83436 770 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 PDGFRLQ15198 375 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 MLF2Q15773 248 aaPredicted RBP18.25■□□□□ 0.51
SHMT2-225ENST00000556798 SLC44A4Q53GD3 710 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 ACAD10Q6JQN1 1059 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 WDR59Q6PJI9 974 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 TPRG1Q6ZUI0 275 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 OR8K1Q8NGG5 319 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.25■□□□□ 0.51
SHMT2-225ENST00000556798 METTL5Q9NRN9 209 aaKnown RBP18.25■□□□□ 0.51
SHMT2-225ENST00000556798 ARHGAP20Q9P2F6 1191 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 LSM7Q9UK45 103 aaKnown RBP18.25■□□□□ 0.51
SHMT2-225ENST00000556798 BZW2Q9Y6E2 419 aaKnown RBP18.25■□□□□ 0.51
SHMT2-225ENST00000556798 F5P12259 2224 aa18.25■□□□□ 0.51
SHMT2-225ENST00000556798 KLKB1P03952 638 aa18.24■□□□□ 0.51
SHMT2-225ENST00000556798 CORO1AP31146 461 aaKnown RBP18.24■□□□□ 0.51
SHMT2-225ENST00000556798 HNRNPH3P31942 346 aaKnown RBP18.24■□□□□ 0.51
SHMT2-225ENST00000556798 KPNA1P52294 538 aaPredicted RBP18.24■□□□□ 0.51
SHMT2-225ENST00000556798 RUNX3Q13761 415 aa18.24■□□□□ 0.51
SHMT2-225ENST00000556798 BEND5Q7L4P6 421 aa18.24■□□□□ 0.51
SHMT2-225ENST00000556798 PLD4Q96BZ4 506 aa18.24■□□□□ 0.51
SHMT2-225ENST00000556798 FAM204AQ9H8W3 233 aa18.24■□□□□ 0.51
SHMT2-225ENST00000556798 C11orf16Q9NQ32 467 aa18.24■□□□□ 0.51
SHMT2-225ENST00000556798 TRPV5Q9NQA5 729 aa18.24■□□□□ 0.51
SHMT2-225ENST00000556798 HBS1LQ9Y450 684 aaKnown RBP18.24■□□□□ 0.51
SHMT2-225ENST00000556798 PIAS3Q9Y6X2 628 aa18.24■□□□□ 0.51
SHMT2-225ENST00000556798 SYNJ2BP-COX16A0A087WUM0 186 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 AKR1B15C9JRZ8 316 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-225ENST00000556798 SLC9A3R1O14745 358 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-225ENST00000556798 ATMINO43313 823 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-225ENST00000556798 TRUB2O95900 331 aaKnown RBP18.23■□□□□ 0.51
SHMT2-225ENST00000556798 CYP17A1P05093 508 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 CALB1P05937 261 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 FLT3P36888 993 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 SCNN1AP37088 669 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 TBX4P57082 545 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 C1QBPQ07021 282 aaKnown RBP18.23■□□□□ 0.51
SHMT2-225ENST00000556798 ARID5BQ14865 1188 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 TRIP4Q15650 581 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-225ENST00000556798 ITPRIPL2Q3MIP1 535 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 TRNP1Q6NT89 227 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 Q6ZNB5 142 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 HTR3DQ70Z44 454 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 DENND1CQ8IV53 801 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 CNGA4Q8IV77 575 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 MCOLN2Q8IZK6 566 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 CPA6Q8N4T0 437 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 EMC1Q8N766 993 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 ATP2A3Q93084 1043 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 SERPINB11Q96P15 392 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 ECT2Q9H8V3 914 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 COX16Q9P0S2 106 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 TBC1D14Q9P2M4 693 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 ADAMTS1Q9UHI8 967 aa18.23■□□□□ 0.51
SHMT2-225ENST00000556798 KMT2EQ8IZD2 1858 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 A0A087X0T9 212 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 IRAK2O43187 625 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 ADCY5O95622 1261 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 NFATC1O95644 943 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 IGLV3-25P01717 112 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 IGLV3-27P01718 113 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 FAM228BP0C875 321 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 TFE3P19532 575 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-225ENST00000556798 CD72P21854 359 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 RRM1P23921 792 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 EIF4A3P38919 411 aaKnown RBP18.22■□□□□ 0.51
SHMT2-225ENST00000556798 VCPP55072 806 aaKnown RBP18.22■□□□□ 0.51
SHMT2-225ENST00000556798 CDK17Q00537 523 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 TSR1Q2NL82 804 aaKnown RBP18.22■□□□□ 0.51
SHMT2-225ENST00000556798 OTUD1Q5VV17 481 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-225ENST00000556798 VPS36Q86VN1 386 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 KIAA1958Q8N8K9 716 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 JOSD2Q8TAC2 188 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 ADAM33Q9BZ11 813 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 TBC1D17Q9HA65 648 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 ZNHIT6Q9NWK9 470 aaKnown RBP18.22■□□□□ 0.51
SHMT2-225ENST00000556798 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.22■□□□□ 0.51
SHMT2-225ENST00000556798 WDR35Q9P2L0 1181 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 TMEM59LQ9UK28 342 aa18.22■□□□□ 0.51
SHMT2-225ENST00000556798 AGO1Q9UL18 857 aaKnown RBP18.22■□□□□ 0.51
SHMT2-225ENST00000556798 ATG2BQ96BY7 2078 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 SHISA7A6NL88 538 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 SPECC1L-ADORA2AF8WAN1 911 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 FTLP02792 175 aaPredicted RBP18.21■□□□□ 0.51
SHMT2-225ENST00000556798 GZMAP12544 262 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 CTHP32929 405 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 NOS2P35228 1153 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 MATKP42679 507 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 HARS2P49590 506 aaKnown RBP18.21■□□□□ 0.51
SHMT2-225ENST00000556798 SULT1E1P49888 294 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 GSCP56915 257 aaPredicted RBP18.21■□□□□ 0.51
SHMT2-225ENST00000556798 DHCR24Q15392 516 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 DNAJC24Q6P3W2 148 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 TXNDC11Q6PKC3 985 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 DRC7Q8IY82 874 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 ADGRG2Q8IZP9 1017 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 TC2NQ8N9U0 490 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 C3orf20Q8ND61 904 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 FLCNQ8NFG4 579 aa18.21■□□□□ 0.51
SHMT2-225ENST00000556798 CHFRQ96EP1 664 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms