RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 ZC3H10Q96K80 434 aaKnown RBP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 CDV3Q9UKY7 258 aaKnown RBP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 STARD13Q9Y3M8 1113 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 HBS1LQ9Y450 684 aaKnown RBP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 PCDHGA5Q9Y5G8 931 aa11.3□□□□□ -0.6
XRCC3-216ENST00000556682 EP300Q09472 2414 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-216ENST00000556682 VPS13AQ96RL7 3174 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 GTPBP10A4D1E9 387 aaKnown RBP11.29□□□□□ -0.6
XRCC3-216ENST00000556682 YJEFN3A6XGL0 299 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 E7ENQ6 273 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 RNF225M0QZC1 329 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-216ENST00000556682 SART1O43290 800 aaKnown RBP11.29□□□□□ -0.6
XRCC3-216ENST00000556682 KLKB1P03952 638 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 TGM1P22735 817 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 BRD2P25440 801 aaKnown RBP11.29□□□□□ -0.6
XRCC3-216ENST00000556682 HOXC13P31276 330 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 GBP1P32455 592 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 ACADSBP45954 432 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 MTIF2P46199 727 aaKnown RBP11.29□□□□□ -0.6
XRCC3-216ENST00000556682 RGS7P49802 495 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 ZNF132P52740 706 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 DAOAP59103 153 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 ZNF445P59923 1031 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 EXOC3L4Q17RC7 722 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 SMYD5Q6GMV2 418 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 PMF1Q6P1K2 205 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 DGLUCYQ7Z3D6 616 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 ARHGEF19Q8IW93 802 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 PGBD3Q8N328 593 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 SPACA7Q96KW9 195 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 TRIM62Q9BVG3 475 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 THAP9Q9H5L6 903 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 ST7Q9NRC1 585 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 DLL3Q9NYJ7 618 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 AGO1Q9UL18 857 aaKnown RBP11.29□□□□□ -0.6
XRCC3-216ENST00000556682 CNTN6Q9UQ52 1028 aa11.29□□□□□ -0.6
XRCC3-216ENST00000556682 HELZP42694 1942 aaKnown RBP11.29□□□□□ -0.6
XRCC3-216ENST00000556682 GOLGA6L22H0YM25 854 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 SGK1O00141 431 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 NPC1O15118 1278 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 EPN2O95208 641 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 ERCC5P28715 1186 aaPredicted RBP11.28□□□□□ -0.6
XRCC3-216ENST00000556682 NTSR1P30989 418 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 USP8P40818 1118 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 MESP2Q0VG99 397 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 TRIP4Q15650 581 aaPredicted RBP11.28□□□□□ -0.6
XRCC3-216ENST00000556682 MEA1Q16626 185 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 PLK5Q496M5 336 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 MPPE1Q53F39 396 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 CT47A1Q5JQC4 288 aaPredicted RBP11.28□□□□□ -0.6
XRCC3-216ENST00000556682 TRIM65Q6PJ69 517 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 TMEM92Q6UXU6 159 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 CLEC17AQ6ZS10 378 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 SFTPA1Q8IWL2 248 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 UNC45BQ8IWX7 931 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 CHPFQ8IZ52 775 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 CPXM2Q8N436 756 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 C12orf50Q8NA57 414 aaPredicted RBP11.28□□□□□ -0.6
XRCC3-216ENST00000556682 MDGA1Q8NFP4 955 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 NETO1Q8TDF5 533 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 DDI1Q8WTU0 396 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 UCMAQ8WVF2 138 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 NDRG1Q92597 394 aaKnown RBP11.28□□□□□ -0.6
XRCC3-216ENST00000556682 EDEM1Q92611 657 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 BHMTQ93088 406 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 KREMEN1Q96MU8 473 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 CRACR2AQ9BSW2 395 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 ARRDC1-AS1Q9H2J1 176 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 PARD6AQ9NPB6 346 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 PLK2Q9NYY3 685 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 APEX2Q9UBZ4 518 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 FBXO10Q9UK96 956 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 MYH10P35580 1976 aa11.28□□□□□ -0.6
XRCC3-216ENST00000556682 OTOGLQ3ZCN5 2332 aa11.27□□□□□ -0.6
XRCC3-216ENST00000556682 GPR179Q6PRD1 2367 aa11.27□□□□□ -0.6
XRCC3-216ENST00000556682 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 GFRA2O00451 464 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 DCLK1O15075 740 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 TRIM24O15164 1050 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 MAP3K13O43283 966 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 TIMM44O43615 452 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 ADAM23O75077 832 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
XRCC3-216ENST00000556682 LATS1O95835 1130 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 PENKP01210 267 aaPredicted RBP11.27□□□□□ -0.61
XRCC3-216ENST00000556682 LTFP02788 710 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 CISD3P0C7P0 127 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 ZNF806P0C7X5 589 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 HOXB2P14652 356 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 GNA15P30679 374 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
XRCC3-216ENST00000556682 AASDHQ4L235 1098 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms