RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 CCNI2Q6ZMN8 369 aaPredicted RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 TAC4Q86UU9 113 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 PSTKQ8IV42 348 aaKnown RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 PYROXD2Q8N2H3 581 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 NTAN1Q96AB6 310 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 FAF2Q96CS3 445 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 ABHD8Q96I13 439 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 TTLL2Q9BWV7 592 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 MTIF3Q9H2K0 278 aaKnown RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 DHX35Q9H5Z1 703 aaKnown RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 EPB41L5Q9HCM4 733 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 GDF3Q9NR23 364 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 HOMER3Q9NSC5 361 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 SAE1Q9UBE0 346 aaPredicted RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 NUDT5Q9UKK9 219 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 LINC01553A4QN01 128 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CCDC151A5D8V7 595 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 SLC38A8A6NNN8 435 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 ZNF487B1APH4 448 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 ARHGEF15O94989 841 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CNPP09543 421 aaKnown RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 MYBL2P10244 700 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CLCN6P51797 869 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 GUCY2DQ02846 1103 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 KRT81Q14533 505 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 ANKRD20A8PQ5CZ79 823 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 PPP6R3Q5H9R7 873 aaPredicted RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 SPRED2Q7Z698 418 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CCDC105Q8IYK2 499 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 PQLC3Q8N755 202 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 PCDH19Q8TAB3 1148 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 RUBCNQ92622 972 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CASP10Q92851 521 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 SLCO2A1Q92959 643 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 FBXO32Q969P5 355 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 KCTD15Q96SI1 283 aaPredicted RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 ZNF670Q9BS34 389 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 SMOC2Q9H3U7 446 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CYP4F11Q9HBI6 524 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 ALG13Q9NP73 1137 aaKnown RBP11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CLIC5Q9NZA1 410 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 SFMBT1Q9UHJ3 866 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 CDH23Q9H251 3354 aa11.26□□□□□ -0.61
LINC01550-206ENST00000556462 ESYT3A0FGR9 886 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 GRXCR1A8MXD5 290 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 IRAK2O43187 625 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 LIASO43766 372 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 ZDHHC11BP0C7U3 371 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 MYOGP15173 224 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 HMGA1P17096 107 aaKnown RBP11.25□□□□□ -0.61
LINC01550-206ENST00000556462 AIF1P55008 147 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 ERVFC1P60507 584 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 DYNLT1P63172 113 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 SCAPQ12770 1279 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 BRD3Q15059 726 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 FAM109BQ6ICB4 259 aaPredicted RBP11.25□□□□□ -0.61
LINC01550-206ENST00000556462 DRICH1Q6PGQ1 229 aaPredicted RBP11.25□□□□□ -0.61
LINC01550-206ENST00000556462 JAMLQ86YT9 394 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 RFX6Q8HWS3 928 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 ARHGAP18Q8N392 663 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 SEC14L1Q92503 715 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 WDCPQ9H6R7 721 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 FAM204AQ9H8W3 233 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC01550-206ENST00000556462 CWC15Q9P013 229 aaKnown RBP11.25□□□□□ -0.61
LINC01550-206ENST00000556462 DNPEPQ9ULA0 475 aa11.25□□□□□ -0.61
LINC01550-206ENST00000556462 GREB1Q4ZG55 1949 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 FAM187AA6NFU0 413 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 APOC4-APOC2K7ER74 178 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 CXCL14O95715 111 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 APOC2P02655 101 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 DNAJB1P25685 340 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 CTNNB1P35222 781 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 CARSP49589 748 aaKnown RBP11.24□□□□□ -0.61
LINC01550-206ENST00000556462 PSEN1P49768 467 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 SHHQ15465 462 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 SLC9A4Q6AI14 798 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 MSANTD2Q6P1R3 559 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 TMC7Q7Z402 723 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 IFT20Q8IY31 132 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 TCEAL8Q8IYN2 117 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 PLD5Q8N7P1 536 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 ATL2Q8NHH9 583 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 SLC35B2Q8TB61 432 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 ACTL9Q8TC94 416 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 SPPL3Q8TCT6 385 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 RNF139Q8WU17 664 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 HNRNPLLQ8WVV9 542 aaKnown RBP11.24□□□□□ -0.61
LINC01550-206ENST00000556462 CASKIN2Q8WXE0 1202 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 HAUS1Q96CS2 278 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 RUNDC3BQ96NL0 473 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 CSPG4P5Q96PW8 444 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 ERP44Q9BS26 406 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 TRIM51Q9BSJ1 452 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 C17orf80Q9BSJ5 609 aa11.24□□□□□ -0.61
LINC01550-206ENST00000556462 MAK16Q9BXY0 300 aaKnown RBP11.24□□□□□ -0.61
LINC01550-206ENST00000556462 TLR8Q9NR97 1041 aaKnown RBP11.24□□□□□ -0.61
LINC01550-206ENST00000556462 MAGED2Q9UNF1 606 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms