RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PALMDQ9NP74 551 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CUEDC1Q9NWM3 386 aaPredicted RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SIX4Q9UIU6 781 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 FBXO10Q9UK96 956 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 UTP11Q9Y3A2 253 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PCDHB4Q9Y5E5 795 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SNTNA6NMZ2 147 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 NOTOA8MTQ0 251 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 GPR25O00155 361 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 FSCN2O14926 492 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ASAP2O43150 1006 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 HBP1O60381 514 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CXCL8P10145 99 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 TCF4P15884 667 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 MMP8P22894 467 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 MAPK4P31152 587 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CHRNA3P32297 505 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 TAS2R40P59535 323 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 BPIFB4P59827 614 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 RPL7AP62424 266 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PHEXP78562 749 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 TTLL4Q14679 1199 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 EAPPQ56P03 285 aaPredicted RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PPP1R15BQ5SWA1 713 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ATF7IP2Q5U623 682 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 DPY19L2Q6NUT2 758 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 TBC1D21Q8IYX1 336 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PGBD3Q8N328 593 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 TFAP2BQ92481 460 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SEPT8Q92599 483 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CDKL2Q92772 493 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CNDP1Q96KN2 507 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 COQ7Q99807 217 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 FAM167BQ9BTA0 163 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CISHQ9NSE2 258 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SH3BGRL2Q9UJC5 107 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 FAM187AA6NFU0 413 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PRRT4C9JH25 899 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 BTBD19C9JJ37 291 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 INO80B-WBP1J3KQ70 363 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PDHXO00330 501 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 B4GALT4O60513 344 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ATP5HO75947 161 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TGDSO95455 350 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SNAI1O95863 264 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 KRT7P08729 469 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF286BP0CG31 522 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 INSRRP14616 1297 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 MAPK9P45984 424 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 KCNJ1P48048 391 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CCT5P48643 541 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 DRG2P55039 364 aaKnown RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 OSTNP61366 133 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 LMNB2Q03252 620 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PPP2R5EQ16537 467 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF568Q3ZCX4 644 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SEL1L2Q5TEA6 688 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CEP68Q76N32 757 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 GALNT7Q86SF2 657 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF554Q86TJ5 538 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SPATA2LQ8IUW3 424 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ZBTB8OSQ8IWT0 167 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 THNSL1Q8IYQ7 743 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ST13P4Q8IZP2 240 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 BRI3BPQ8WY22 251 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SLCO2A1Q92959 643 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CFAP57Q96MR6 1250 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 FMO2Q99518 471 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 C2orf40Q9H1Z8 148 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SEMA4AQ9H3S1 761 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 LRRC19Q9H756 370 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 SCPEP1Q9HB40 452 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 FAM114A2Q9NRY5 505 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CHST7Q9NS84 486 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ERAP1Q9NZ08 941 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 DDX20Q9UHI6 824 aaKnown RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 FAM50BQ9Y247 325 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TRPM7Q96QT4 1865 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 YKT6O15498 198 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 THAP12O43422 761 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 TCEA3O75764 348 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PROSCO94903 275 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 NFICP08651 508 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 WEE2P0C1S8 567 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CD58P19256 250 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 POLR2EP19388 210 aaKnown RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 COILP38432 576 aaPredicted RBP5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ADCYAP1R1P41586 468 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 AP3M2P53677 418 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 OGDHQ02218 1023 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 ZBTB16Q05516 673 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 MYO1EQ12965 1108 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 CLUL1Q15846 466 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 KRT71Q3SY84 523 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 MARCH8Q5T0T0 291 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 PPP2R2DQ66LE6 453 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 LRRTM3Q86VH5 581 aa5.27□□□□□ -1.57
TMEM260-210ENST00000556422 MAP7D3Q8IWC1 876 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms