RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 KLKB1P03952 638 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 CYP1A1P04798 512 aaPredicted RBP10.1□□□□□ -0.79
SRP54-210ENST00000556380 MMEP08473 750 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 CD46P15529 392 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 AOC1P19801 751 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 CD72P21854 359 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 AVPR2P30518 371 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 SOX9P48436 509 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 VCPP55072 806 aaKnown RBP10.1□□□□□ -0.79
SRP54-210ENST00000556380 UBASH3AP57075 661 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TPM4P67936 248 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 FMO1Q01740 532 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 CDR2Q01850 454 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TAF5Q15542 800 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 GAB4Q2WGN9 574 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 ITPRIPL2Q3MIP1 535 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 PTPN20Q4JDL3 420 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 FIGNQ5HY92 759 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 BTBD8Q5XKL5 378 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 CC2D1AQ6P1N0 951 aaPredicted RBP10.1□□□□□ -0.79
SRP54-210ENST00000556380 MSANTD2Q6P1R3 559 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TXNDC11Q6PKC3 985 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TPRG1Q6ZUI0 275 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TADA2BQ86TJ2 420 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TMEM105Q8N8V8 129 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TMEM35BQ8NCS4 154 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 C1orf131Q8NDD1 294 aaKnown RBP10.1□□□□□ -0.79
SRP54-210ENST00000556380 OLIG1Q8TAK6 271 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 TTC8Q8TAM2 541 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 EDEM1Q92611 657 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 PCMTD1Q96MG8 357 aaPredicted RBP10.1□□□□□ -0.79
SRP54-210ENST00000556380 SPAG5Q96R06 1193 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 PCDHB18PQ96TA0 734 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 SYT11Q9BT88 431 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 OSBPL6Q9BZF3 934 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 EDEM3Q9BZQ6 932 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 FOXQ1Q9C009 403 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 C8orf33Q9H7E9 229 aaPredicted RBP10.1□□□□□ -0.79
SRP54-210ENST00000556380 ECT2Q9H8V3 914 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 ST7Q9NRC1 585 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 ABCC13Q9NSE7 274 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 MARCH2Q9P0N8 246 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 IFNKQ9P0W0 207 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 DLGAP2Q9P1A6 1054 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 FCF1Q9Y324 198 aaKnown RBP10.1□□□□□ -0.79
SRP54-210ENST00000556380 PIAS3Q9Y6X2 628 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 KIF26AQ9ULI4 1882 aaPredicted RBP10.1□□□□□ -0.79
SRP54-210ENST00000556380 WDFY4Q6ZS81 3184 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 SPECC1L-ADORA2AF8WAN1 911 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 MAN2B1O00754 1011 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 SLC9A3R1O14745 358 aaPredicted RBP10.09□□□□□ -0.79
SRP54-210ENST00000556380 SCAMP3O14828 347 aaKnown RBP10.09□□□□□ -0.79
SRP54-210ENST00000556380 STC2O76061 302 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 LSM8O95777 96 aaKnown RBP10.09□□□□□ -0.79
SRP54-210ENST00000556380 LTFP02788 710 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 ERBB2P04626 1255 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 GLI1P08151 1106 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 CTHP32929 405 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 GABRB2P47870 512 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 IFNAR2P48551 515 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 NOMO3P69849 1222 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 COG7P83436 770 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 EFEMP1Q12805 493 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 EIF4EBP2Q13542 120 aaPredicted RBP10.09□□□□□ -0.79
SRP54-210ENST00000556380 TRIP4Q15650 581 aaPredicted RBP10.09□□□□□ -0.79
SRP54-210ENST00000556380 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
SRP54-210ENST00000556380 RHBDF2Q6PJF5 856 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 OLFML1Q6UWY5 402 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 ZNF852Q6ZMS4 543 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 RALGPS2Q86X27 583 aaPredicted RBP10.09□□□□□ -0.79
SRP54-210ENST00000556380 MIB1Q86YT6 1006 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 BBS7Q8IWZ6 715 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 FLCNQ8NFG4 579 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 PJA1Q8NG27 643 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 CSGALNACT1Q8TDX6 532 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 ATP2A3Q93084 1043 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 CLDN23Q96B33 292 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 P2RY11Q96G91 374 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 MSANTD3Q96H12 275 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 PIWIL1Q96J94 861 aaKnown RBP10.09□□□□□ -0.79
SRP54-210ENST00000556380 NELL2Q99435 816 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 NACA2Q9H009 215 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 LTB4R2Q9NPC1 389 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 PRDM9Q9NQV7 894 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 ASNSD1Q9NWL6 643 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 AIPL1Q9NZN9 384 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 TBC1D14Q9P2M4 693 aa10.09□□□□□ -0.79
SRP54-210ENST00000556380 FAM170BA6NMN3 283 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 SART1O43290 800 aaKnown RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 IGLV3-25P01717 112 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 IGLV3-27P01718 113 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 CYP17A1P05093 508 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 IRF1P10914 325 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 UNGP13051 313 aaPredicted RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 TARSP26639 723 aaKnown RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 GJA4P35212 333 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 KPNA1P52294 538 aaPredicted RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 YWHAZP63104 245 aaKnown RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 SLC6A3Q01959 620 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms