RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TMEM25Q86YD3 366 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 ZBTB44Q8NCP5 570 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 NKD2Q969F2 451 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-206ENST00000556375 ACDQ96AP0 544 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 PNKPQ96T60 521 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 FUCA2Q9BTY2 467 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 TRIM62Q9BVG3 475 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 LHX5Q9H2C1 402 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 SEMA4AQ9H3S1 761 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 ARHGEF4Q9NR80 690 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 WDR35Q9P2L0 1181 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 SIK3Q9Y2K2 1263 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 CEP83Q9Y592 693 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 GVINP1Q7Z2Y8 2422 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 ZNF292O60281 2723 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 OTOGLQ3ZCN5 2332 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 PRR23AA6NEV1 266 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 LRRC10BA6NIK2 292 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 NEDD8-MDP1E9PL57 170 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 K7EQS6 105 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 K7ESF4 209 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 PAPSS1O43252 624 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 MSI1O43347 362 aaKnown RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 TULP3O75386 442 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 KAT7O95251 611 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 LATS1O95835 1130 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 APODP05090 189 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 TYRP14679 529 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 HOXA6P31267 233 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 KRT9P35527 623 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 CHKAP35790 457 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 GRIA2P42262 883 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 SLC6A11P48066 632 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 KLK7P49862 253 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 KDSRQ06136 332 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 TPGS1Q6ZTW0 290 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 BEND5Q7L4P6 421 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 APTXQ7Z2E3 356 aaKnown RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 ALYREFQ86V81 257 aaKnown RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 SCUBE3Q8IX30 993 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 FAM217AQ8IXS0 508 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 PHTF2Q8N3S3 785 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 CPXM2Q8N436 756 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 C1orf131Q8NDD1 294 aaKnown RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 RPLP0P6Q8NHW5 317 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 FAM149B1Q96BN6 582 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 NOX5Q96PH1 765 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 CPXM1Q96SM3 734 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 BBS2Q9BXC9 721 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 STK33Q9BYT3 514 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 FAM207AQ9NSI2 230 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 C2orf42Q9NWW7 574 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 DEC1Q9P2X7 70 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 SFMBT1Q9UHJ3 866 aa12.04□□□□□ -0.48
SLIRP-206ENST00000556375 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 MYO18AQ92614 2054 aaKnown RBP12.04□□□□□ -0.48
SLIRP-206ENST00000556375 FRYLO94915 3013 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 EML5Q05BV3 1969 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 A0A0A0MRY4 1105 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 GFRA3O60609 400 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 LILRB5O75023 590 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 PENKP01210 267 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-206ENST00000556375 IGLV3-27P01718 113 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 FYNP06241 537 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 NCAM1P13591 858 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 ATP1A3P13637 1013 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 CYP11B1P15538 503 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 ZNF165P49910 485 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 RING1Q06587 406 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 MESP2Q0VG99 397 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 NNTQ13423 1086 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 SYCP1Q15431 976 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 GRAMD4Q6IC98 578 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 SYT13Q7L8C5 426 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 DENND1CQ8IV53 801 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 DHX40Q8IX18 779 aaKnown RBP12.03□□□□□ -0.48
SLIRP-206ENST00000556375 WDTC1Q8N5D0 677 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 NAT16Q8N8M0 369 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 TERB1Q8NA31 727 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 EPS8L1Q8TE68 723 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 DQX1Q8TE96 717 aaKnown RBP12.03□□□□□ -0.48
SLIRP-206ENST00000556375 USP33Q8TEY7 942 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 PPP1R13BQ96KQ4 1090 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 SERPINB11Q96P15 392 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 XPO6Q96QU8 1125 aaKnown RBP12.03□□□□□ -0.48
SLIRP-206ENST00000556375 ERGIC2Q96RQ1 377 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 DNAJC17Q9NVM6 304 aaKnown RBP12.03□□□□□ -0.48
SLIRP-206ENST00000556375 TJP2Q9UDY2 1190 aa12.03□□□□□ -0.48
SLIRP-206ENST00000556375 SPAG17Q6Q759 2223 aa12.02□□□□□ -0.48
SLIRP-206ENST00000556375 SYCE3A1L190 88 aa12.02□□□□□ -0.49
SLIRP-206ENST00000556375 SMTNL1A8MU46 457 aa12.02□□□□□ -0.49
SLIRP-206ENST00000556375 EPHB6O15197 1021 aa12.02□□□□□ -0.49
SLIRP-206ENST00000556375 GLI1P08151 1106 aa12.02□□□□□ -0.49
SLIRP-206ENST00000556375 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-206ENST00000556375 CDH5P33151 784 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-206ENST00000556375 TNFRSF4P43489 277 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms