RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SERPINF2P08697 491 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 TRIM49P0CI25 452 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 TRIM49CP0CI26 452 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 VDRP11473 427 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 GABRG2P18507 467 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 CD58P19256 250 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 TBXAS1P24557 533 aaPredicted RBP8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 PRCPP42785 496 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 KDSRQ06136 332 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 ZNF33AQ06730 810 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC14A1Q13336 389 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 ORC1Q13415 861 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 EIF4HQ15056 248 aaKnown RBP8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 STILQ15468 1287 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 TRIM61Q5EBN2 209 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 FYB2Q5VWT5 728 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 LYSMD4Q5XG99 296 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 TPGS1Q6ZTW0 290 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 GPRIN1Q7Z2K8 1008 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 PIGZQ86VD9 579 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 SFTPA1Q8IWL2 248 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 FAM217AQ8IXS0 508 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 CHPFQ8IZ52 775 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 FMR1NBQ8N0W7 255 aaPredicted RBP8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 ENGASEQ8NFI3 743 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 HMGB4Q8WW32 186 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 KCTD13Q8WZ19 329 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 SEMA4DQ92854 862 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 FOXJ1Q92949 421 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 ELMO3Q96BJ8 720 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 DHTKD1Q96HY7 919 aaPredicted RBP8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC32A1Q9H598 525 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 THAP10Q9P2Z0 257 aaPredicted RBP8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 HESX1Q9UBX0 185 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 MBD1Q9UIS9 605 aaPredicted RBP8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 STOML2Q9UJZ1 356 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 INVSQ9Y283 1065 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 HBS1LQ9Y450 684 aaKnown RBP8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 THADAQ6YHU6 1953 aa8.17□□□□□ -1.1
PTCSC3-201ENST00000556013 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 SCAMP3O14828 347 aaKnown RBP8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CYP26A1O43174 497 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 ZBED1O96006 694 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 KLKB1P03952 638 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 SYPP08247 313 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 PAEPP09466 180 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 IRF1P10914 325 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 OXTRP30559 389 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 RDXP35241 583 aaKnown RBP8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 PI4KAP42356 2102 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 TKTL1P51854 596 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 BCAT1P54687 386 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 MFAP3P55082 362 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 YWHAGP61981 247 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CETN1Q12798 172 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 STIM1Q13586 685 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CUL2Q13617 745 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 STARD3Q14849 445 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 TRIP4Q15650 581 aaPredicted RBP8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CNGA2Q16280 664 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 MPPE1Q53F39 396 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 ZNF394Q53GI3 561 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 SGO2Q562F6 1265 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 MPP7Q5T2T1 576 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 SYCP2LQ5T4T6 812 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 EGFLAMQ63HQ2 1017 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 TCEAL6Q6IPX3 200 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 TTC30AQ86WT1 665 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 MIB1Q86YT6 1006 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 TMEFF1Q8IYR6 380 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 ZNF557Q8N988 423 aaPredicted RBP8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CADM4Q8NFZ8 388 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 RLN3Q8WXF3 142 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 NUP205Q92621 2012 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 TATDN2Q93075 761 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 TCEAL3Q969E4 200 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 AZIN2Q96A70 460 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 PLD4Q96BZ4 506 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CHAMP1Q96JM3 812 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 MRGPRX1Q96LB2 322 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 HSFY1Q96LI6 401 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CEP63Q96MT8 703 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 ZDHHC5Q9C0B5 715 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 GOLPH3LQ9H4A5 285 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 SMOC1Q9H4F8 434 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 LRRC4Q9HBW1 653 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CAPN10Q9HC96 672 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 CNGB3Q9NQW8 809 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 ITM2CQ9NQX7 267 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 ABCC13Q9NSE7 274 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 TMEM74BQ9NUR3 256 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 ELOVL2Q9NXB9 296 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 MARCH2Q9P0N8 246 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 SUSD2Q9UGT4 822 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 ARMCX3Q9UH62 379 aaPredicted RBP8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 AGO1Q9UL18 857 aaKnown RBP8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 EPG5Q9HCE0 2579 aa8.16□□□□□ -1.1
PTCSC3-201ENST00000556013 MYH10P35580 1976 aa8.15□□□□□ -1.1
PTCSC3-201ENST00000556013 MYO16Q9Y6X6 1858 aa8.15□□□□□ -1.1
PTCSC3-201ENST00000556013 IGHV1OR15-9A0A0B4J2B8 117 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms