RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 C16orf89Q6UX73 402 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 FRMD7Q6ZUT3 714 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 UBR7Q8N806 425 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 CMASQ8NFW8 434 aaPredicted RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 CHURC1Q8WUH1 139 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 SNRNP27Q8WVK2 155 aaKnown RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 SLC2A11Q9BYW1 496 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 RSAD1Q9HA92 442 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 PKD2L1Q9P0L9 805 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 ZBTB21Q9ULJ3 1066 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 GNEQ9Y223 722 aaKnown RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 COL16A1Q07092 1604 aaPredicted RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 SPDYE2BA6NHP3 402 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 ITM2AO43736 263 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 GSRP00390 522 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 SPDYE6P0CI01 402 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 CSH1P0DML2 217 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 CSH2P0DML3 217 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 ALDH1B1P30837 517 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 POLR2BP30876 1174 aaKnown RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 SFNP31947 248 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 MAGEA10P43363 369 aaPredicted RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 HSD17B4P51659 736 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 PLOD1Q02809 727 aaPredicted RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 TCP10Q12799 353 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 UGCGQ16739 394 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 TKFCQ3LXA3 575 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 SPDYE2Q495Y8 402 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 IYDQ6PHW0 289 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 POTEHQ6S545 545 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 MAVSQ7Z434 540 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 ADGRF2Q8IZF7 708 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 KCTD6Q8NC69 237 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 GSDMBQ8TAX9 411 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 ATP2A3Q93084 1043 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 VPS50Q96JG6 964 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 SH2D3AQ9BRG2 576 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 TRIM56Q9BRZ2 755 aaKnown RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 MRIQ9BWK5 157 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 TMEM165Q9HC07 324 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 RAB6BQ9NRW1 208 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 ARHGAP28Q9P2N2 729 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 TUBGCP4Q9UGJ1 667 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 HERC5Q9UII4 1024 aaKnown RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 UBIAD1Q9Y5Z9 338 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 SIPA1L1O43166 1804 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 RGPD3A6NKT7 1758 aaPredicted RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 RGPD4Q7Z3J3 1758 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 TMEM150BA6NC51 233 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 SPDYE16A6NNV3 312 aaPredicted RBP8.02□□□□□ -1.12
CHD8-209ENST00000555935 H3BSA7 217 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 WDR46O15213 610 aaKnown RBP8.02□□□□□ -1.12
CHD8-209ENST00000555935 DKC1O60832 514 aaKnown RBP eCLIP8.02□□□□□ -1.12
CHD8-209ENST00000555935 AVILO75366 819 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 LYPLA1O75608 230 aaPredicted RBP8.02□□□□□ -1.12
CHD8-209ENST00000555935 GH2P01242 217 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 NCF2P19878 526 aaPredicted RBP8.02□□□□□ -1.12
CHD8-209ENST00000555935 IL1R2P27930 398 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 HOXA10P31260 410 aaPredicted RBP8.02□□□□□ -1.12
CHD8-209ENST00000555935 ALDH3B2P48448 385 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 HARS2P49590 506 aaKnown RBP8.02□□□□□ -1.12
CHD8-209ENST00000555935 LIG4P49917 911 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 PSMD7P51665 324 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 TUBA4AP68366 448 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 SPP2Q13103 211 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 PDAP1Q13442 181 aaKnown RBP8.02□□□□□ -1.12
CHD8-209ENST00000555935 TFDP2Q14188 446 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 SMTNL2Q2TAL5 461 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 FAM47CQ5HY64 1035 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 LMBRD2Q68DH5 695 aaPredicted RBP8.02□□□□□ -1.12
CHD8-209ENST00000555935 C4orf22Q6V702 233 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 CYS1Q717R9 158 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 SH3BP5LQ7L8J4 393 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 MCUQ8NE86 351 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 TSPAN14Q8NG11 270 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 BSNDQ8WZ55 320 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 RTP4Q96DX8 246 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 HSPBAP1Q96EW2 488 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 FAM84AQ96KN4 292 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 NUF2Q9BZD4 464 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 IMPG2Q9BZV3 1241 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 KLC2Q9H0B6 622 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 PLAC1Q9HBJ0 212 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 SMYD2Q9NRG4 433 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 FAM198AQ9UFP1 575 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 ZNF232Q9UNY5 417 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 NUB1Q9Y5A7 615 aa8.02□□□□□ -1.12
CHD8-209ENST00000555935 SLX4Q8IY92 1834 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 KANSL1LA0AUZ9 987 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 HMX2A2RU54 273 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 SLC15A5A6NIM6 579 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 WDR64B1ANS9 1081 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 ZNF195O14628 629 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 PLIN3O60664 434 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 PLA2G6O60733 806 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 SUPT3HO75486 399 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 THRAP10827 490 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 KRT3P12035 628 aa8.02□□□□□ -1.13
CHD8-209ENST00000555935 PSMC3P17980 439 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms