RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TKTL1P51854 596 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 ZNF445P59923 1031 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 YWHAGP61981 247 aaKnown RBP eCLIP13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 BST2Q10589 180 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 LMAN2Q12907 356 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 SGO2Q562F6 1265 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 FYB2Q5VWT5 728 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 TCEAL6Q6IPX3 200 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 SLC36A4Q6YBV0 504 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 TPGS1Q6ZTW0 290 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 MIB1Q86YT6 1006 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 SYT12Q8IV01 421 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 UBR7Q8N806 425 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 KCTD13Q8WZ19 329 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 TCEAL3Q969E4 200 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 PLD4Q96BZ4 506 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 SMOC1Q9H4F8 434 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 MARCH2Q9P0N8 246 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 HESX1Q9UBX0 185 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 NUDT5Q9UKK9 219 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 TSPAN16Q9UKR8 245 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
HNRNPC-221ENST00000555883 MDM4O15151 490 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 TRIM24O15164 1050 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 ZBTB24O43167 697 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 MAP3K13O43283 966 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 PAEPP09466 180 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 VDRP11473 427 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 GABRG2P18507 467 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 FMO5P49326 533 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 DHPSP49366 369 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 SHC2P98077 582 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 ENPP2Q13822 863 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 EIF4HQ15056 248 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 PKDCCQ504Y2 493 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 DAB2IPQ5VWQ8 1189 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 EGFLAMQ63HQ2 1017 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 BHLHA9Q7RTU4 235 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 RABEPKQ7Z6M1 372 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 METTL3Q86U44 580 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 CHPFQ8IZ52 775 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 RLN3Q8WXF3 142 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 SLC2A11Q9BYW1 496 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 MBD1Q9UIS9 605 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 STOML2Q9UJZ1 356 aa13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 AGO1Q9UL18 857 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-221ENST00000555883 TRIM49BA6NDI0 452 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 O00370 1275 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 LATS1O95835 1130 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 CYBBP04839 570 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 PMLP29590 882 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 CORO1AP31146 461 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 PDE4CQ08493 712 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 CETN1Q12798 172 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 EFEMP1Q12805 493 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 STILQ15468 1287 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 TRIP4Q15650 581 aaPredicted RBP13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 GOLGA7BQ2TAP0 167 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 LYSMD4Q5XG99 296 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 SLC23A3Q6PIS1 610 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 LCLAT1Q6UWP7 414 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 TOGARAM2Q6ZUX3 1019 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 RSRC2Q7L4I2 434 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 PGBD3Q8N328 593 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 CEP76Q8TAP6 659 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 IPO4Q8TEX9 1081 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 CNTNAP3BQ96NU0 1288 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 CNTNAP3Q9BZ76 1288 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 IRX2Q9BZI1 471 aaPredicted RBP13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 LRRC4Q9HBW1 653 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 ZDHHC4Q9NPG8 344 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 TMEM9BQ9NQ34 198 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 CNGB3Q9NQW8 809 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 CALCOCO1Q9P1Z2 691 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 PILRBQ9UKJ0 227 aa13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 HBS1LQ9Y450 684 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-221ENST00000555883 MYH10P35580 1976 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 BICDL2A1A5D9 508 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 CDX4O14627 284 aaPredicted RBP13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 KCNK5O95279 499 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 NDUFV2P19404 249 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 CSRP1P21291 193 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 PTGER3P43115 390 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 MFAP3P55082 362 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 GCNT1Q02742 428 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 TTI2Q6NXR4 508 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 TMEFF1Q8IYR6 380 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 UCMAQ8WVF2 138 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 IRGQQ8WZA9 623 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 PIGKQ92643 395 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 P2RY11Q96G91 374 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 PIWIL1Q96J94 861 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 NT5C1BQ96P26 610 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 ACOX2Q99424 681 aa13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-221ENST00000555883 ULBP1Q9BZM6 244 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms