RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ASCC2Q9H1I8 757 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 C12orf65Q9H3J6 166 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 DENND2DQ9H6A0 471 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 USP29Q9HBJ7 922 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 XAB2Q9HCS7 855 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 ETNK2Q9NVF9 386 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 KCNK4Q9NYG8 393 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 NKX1-2Q9UD57 310 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 TTLL3Q9Y4R7 772 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 MAD1L1Q9Y6D9 718 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 OTOFQ9HC10 1997 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 A0A087WZ62 844 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 ZNF487B1APH4 448 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 MDM4O15151 490 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 ENTPD5O75356 428 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 STK10O94804 968 aaKnown RBP7.25□□□□□ -1.25
TDP1-213ENST00000555880 APOEP02649 317 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 ATP5BP06576 529 aaKnown RBP7.25□□□□□ -1.25
TDP1-213ENST00000555880 IQCF3P0C7M6 154 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 MYL2P10916 166 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 PRKCHP24723 683 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 CNTFP26441 200 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 RBL1P28749 1068 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 NR2C2P49116 596 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 RGS7P49802 495 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 NRLP54845 237 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 SLC6A3Q01959 620 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 CCDC14Q49A88 953 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 CMPK2Q5EBM0 449 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 C6orf163Q5TEZ5 329 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 MAP1SQ66K74 1059 aaPredicted RBP7.25□□□□□ -1.25
TDP1-213ENST00000555880 TRIM68Q6AZZ1 485 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 C4orf50Q6ZRC1 276 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 CYP4V2Q6ZWL3 525 aaPredicted RBP7.25□□□□□ -1.25
TDP1-213ENST00000555880 CRLF3Q8IUI8 442 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 NUDCD3Q8IVD9 361 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 SMC1BQ8NDV3 1235 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 PPP1R14CQ8TAE6 165 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 GSDMBQ8TAX9 411 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 MICAL1Q8TDZ2 1067 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 DEPDC1BQ8WUY9 529 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 NLRP7Q8WX94 980 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 E2F7Q96AV8 911 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 CPB2Q96IY4 423 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 C7orf26Q96N11 449 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 FERMT1Q9BQL6 677 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 FDXACB1Q9BRP7 624 aaPredicted RBP7.25□□□□□ -1.25
TDP1-213ENST00000555880 CADM1Q9BY67 442 aaKnown RBP7.25□□□□□ -1.25
TDP1-213ENST00000555880 MMADHCQ9H3L0 296 aaPredicted RBP7.25□□□□□ -1.25
TDP1-213ENST00000555880 POPDC2Q9HBU9 364 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 GBA2Q9HCG7 927 aaPredicted RBP7.25□□□□□ -1.25
TDP1-213ENST00000555880 PCDH18Q9HCL0 1135 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 ARL8BQ9NVJ2 186 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 MKS1Q9NXB0 559 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 KANSL3Q9P2N6 904 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 PLLPQ9Y342 182 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 LRRC42Q9Y546 428 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 TRIP11Q15643 1979 aa7.25□□□□□ -1.25
TDP1-213ENST00000555880 A0A0G2JLL6 359 aaPredicted RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 ASB14A6NK59 587 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 FCHO1O14526 889 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 BIRC5O15392 142 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 GSC2O15499 205 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 GCATO75600 419 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 FAM155BO75949 473 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 INSRRP14616 1297 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 GM2AP17900 193 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 ARF4P18085 180 aaPredicted RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 TPSB2P20231 275 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 ATP6V1C1P21283 382 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CYP2F1P24903 491 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 DNAJB2P25686 324 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CCNFP41002 786 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 GCLCP48506 637 aaPredicted RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 PTDSS1P48651 473 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 LAMC2Q13753 1193 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 BLMHQ13867 455 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 TPSAB1Q15661 275 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 TBCCQ15814 346 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 SLC10A6Q3KNW5 377 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 FAXCQ5TGI0 409 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 FAM91A1Q658Y4 838 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 OLFML1Q6UWY5 402 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 SH2D5Q6ZV89 423 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 USP50Q70EL3 339 aaPredicted RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 PRRT2Q7Z6L0 340 aaPredicted RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 PRPF39Q86UA1 669 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 CAND1Q86VP6 1230 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 PQLC3Q8N755 202 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.24□□□□□ -1.25
TDP1-213ENST00000555880 ARMC2Q8NEN0 867 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PCDH19Q8TAB3 1148 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 TTC8Q8TAM2 541 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CXorf38Q8TB03 319 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CCDC110Q8TBZ0 833 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 DNAJC9Q8WXX5 260 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 ATP2A3Q93084 1043 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PPP1R16BQ96T49 567 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 MIPEPQ99797 713 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 EBNA1BP2Q99848 306 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms