RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZBTB44Q8NCP5 570 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 IRGQQ8WZA9 623 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 CPXM1Q96SM3 734 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 CDK5RAP1Q96SZ6 601 aaKnown RBP14.3□□□□□ -0.12
SNX6-203ENST00000555416 ZDHHC4Q9NPG8 344 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 PLK2Q9NYY3 685 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 LSM7Q9UK45 103 aaKnown RBP14.3□□□□□ -0.12
SNX6-203ENST00000555416 HCN2Q9UL51 889 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 PCDHGC3Q9UN70 934 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 FRYLO94915 3013 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 LGALS16A8MUM7 142 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 CHURC1-FNTBB4DL54 471 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 NEDD8-MDP1E9PL57 170 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 GFRA3O60609 400 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 FBXO21O94952 628 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 KAT7O95251 611 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 PAPSS2O95340 614 aaPredicted RBP14.29□□□□□ -0.12
SNX6-203ENST00000555416 PXNP49023 591 aaPredicted RBP14.29□□□□□ -0.12
SNX6-203ENST00000555416 FNTBP49356 437 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 PITX1P78337 314 aaPredicted RBP14.29□□□□□ -0.12
SNX6-203ENST00000555416 COG7P83436 770 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 GAD2Q05329 585 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 PTK2Q05397 1052 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 GOLGA8FQ08AF8 430 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 GOLGA8DPQ0D2H9 430 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
SNX6-203ENST00000555416 C2orf27AQ580R0 203 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 SYPL2Q5VXT5 272 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 MSANTD2Q6P1R3 559 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 C1orf131Q8NDD1 294 aaKnown RBP14.29□□□□□ -0.12
SNX6-203ENST00000555416 USP33Q8TEY7 942 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 STK32AQ8WU08 396 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 DDX1Q92499 740 aaKnown RBP14.29□□□□□ -0.12
SNX6-203ENST00000555416 PNKPQ96T60 521 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 BBS2Q9BXC9 721 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 ARHGEF4Q9NR80 690 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 ABCC13Q9NSE7 274 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 FAM207AQ9NSI2 230 aaPredicted RBP14.29□□□□□ -0.12
SNX6-203ENST00000555416 ZSCAN32Q9NX65 697 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 MARK1Q9P0L2 795 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 STRIP2Q9ULQ0 834 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 NAALADL1Q9UQQ1 740 aa14.29□□□□□ -0.12
SNX6-203ENST00000555416 A0A0A0MRY4 1105 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 LRRC10BA6NIK2 292 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 F8VZ95 297 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 CACNG3O60359 315 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 LILRB5O75023 590 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 ERBB2P04626 1255 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 TYRP14679 529 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 HNRNPLP14866 589 aaKnown RBP eCLIP14.28□□□□□ -0.126e-14■□□□□ 8.8
SNX6-203ENST00000555416 CYP11B1P15538 503 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 EIF2DP41214 584 aaKnown RBP14.28□□□□□ -0.12
SNX6-203ENST00000555416 KIR2DL1P43626 348 aaPredicted RBP14.28□□□□□ -0.12
SNX6-203ENST00000555416 POLR2FP61218 127 aaKnown RBP14.28□□□□□ -0.12
SNX6-203ENST00000555416 SYCP1Q15431 976 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 FBXO43Q4G163 708 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 TOGARAM2Q6ZUX3 1019 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 NOP9Q86U38 636 aaKnown RBP14.28□□□□□ -0.12
SNX6-203ENST00000555416 CCDC33Q8N5R6 958 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 SUMF1Q8NBK3 374 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 ADAM32Q8TC27 787 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 DQX1Q8TE96 717 aaKnown RBP14.28□□□□□ -0.12
SNX6-203ENST00000555416 RNF139Q8WU17 664 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 NLRC4Q9NPP4 1024 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 OLA1Q9NTK5 396 aaKnown RBP14.28□□□□□ -0.12
SNX6-203ENST00000555416 CLEC4EQ9ULY5 219 aa14.28□□□□□ -0.12
SNX6-203ENST00000555416 RIF1Q5UIP0 2472 aaKnown RBP14.27□□□□□ -0.12
SNX6-203ENST00000555416 SYCE3A1L190 88 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 GFRA2O00451 464 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 HRO43593 1189 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 PENKP01210 267 aaPredicted RBP14.27□□□□□ -0.13
SNX6-203ENST00000555416 IGLV3-27P01718 113 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 APODP05090 189 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 CISD3P0C7P0 127 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 ACADSBP45954 432 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 JAM2P57087 298 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 IQCB1Q15051 598 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 PTPN20Q4JDL3 420 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 TAF3Q5VWG9 929 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 FYB2Q5VWT5 728 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 FAM217AQ8IXS0 508 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 ALLCQ8N6M5 410 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 SLC20A1Q8WUM9 679 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 NKD2Q969F2 451 aaPredicted RBP14.27□□□□□ -0.13
SNX6-203ENST00000555416 FAM149B1Q96BN6 582 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 PLD4Q96BZ4 506 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 MYEOVQ96EZ4 313 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 PPP1R13BQ96KQ4 1090 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 HHIPQ96QV1 700 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 STK33Q9BYT3 514 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 LHX5Q9H2C1 402 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 DNAJC17Q9NVM6 304 aaKnown RBP14.27□□□□□ -0.13
SNX6-203ENST00000555416 HBS1LQ9Y450 684 aaKnown RBP14.27□□□□□ -0.13
SNX6-203ENST00000555416 PCDHGA2Q9Y5H1 932 aa14.27□□□□□ -0.13
SNX6-203ENST00000555416 GOLGA6L7A0A1B0GV03 622 aa14.26□□□□□ -0.13
SNX6-203ENST00000555416 PRRT4C9JH25 899 aa14.26□□□□□ -0.13
SNX6-203ENST00000555416 TEX33O43247 280 aa14.26□□□□□ -0.13
SNX6-203ENST00000555416 TSPAN3O60637 253 aa14.26□□□□□ -0.13
SNX6-203ENST00000555416 GRAP2O75791 330 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms