RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ADCY2Q08462 1091 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 SLC25A52Q3SY17 297 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 GSTA5Q7RTV2 222 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 CCDC105Q8IYK2 499 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 ELMOD1Q8N336 334 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 SPATA4Q8NEY3 305 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 C8orf48Q96LL4 319 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 GDF15Q99988 308 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 SMG9Q9H0W8 520 aaKnown RBP10.61□□□□□ -0.71
NEK9-205ENST00000555405 MAN1C1Q9NR34 630 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.61□□□□□ -0.71
NEK9-205ENST00000555405 ABCC13Q9NSE7 274 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 MARCH2Q9P0N8 246 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 CKMP06732 381 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 CSH1P0DML2 217 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 CSH2P0DML3 217 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 AMPD1P23109 780 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 CTNNA1P35221 906 aaKnown RBP10.61□□□□□ -0.71
NEK9-205ENST00000555405 PEX5P50542 639 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 CLUL1Q15846 466 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 NPNTQ6UXI9 565 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 ANKS1BQ7Z6G8 1248 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 TIFAQ96CG3 184 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 HERPUD2Q9BSE4 406 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 PRDM12Q9H4Q4 367 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 C2orf78A6NCI8 922 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 EPOPA6NHQ4 379 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 DAB1O75553 588 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 RTN3O95197 1032 aaPredicted RBP10.6□□□□□ -0.71
NEK9-205ENST00000555405 MBL2P11226 248 aaPredicted RBP10.6□□□□□ -0.71
NEK9-205ENST00000555405 PRUNE1Q86TP1 453 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 ARL14EPQ8N8R7 260 aaPredicted RBP10.6□□□□□ -0.71
NEK9-205ENST00000555405 IFT81Q8WYA0 676 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 GDAP1L1Q96MZ0 367 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 AMACRQ9UHK6 382 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 ESYT3A0FGR9 886 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 LINC00271P0C7V0 271 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 GBP1P32455 592 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 RDXP35241 583 aaKnown RBP10.6□□□□□ -0.71
NEK9-205ENST00000555405 CAMK1Q14012 370 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 SKIV2LQ15477 1246 aaKnown RBP10.6□□□□□ -0.71
NEK9-205ENST00000555405 EFHC2Q5JST6 749 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 RAB41Q5JT25 222 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 SYCP2LQ5T4T6 812 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 TPGS2Q68CL5 300 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 SSX2IPQ9Y2D8 614 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 PCDHA11Q9Y5I1 949 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 GOLGA6L10A0A0M3HER8 536 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 TSPAN3O60637 253 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 GOT1P17174 413 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 ARL4AP40617 200 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 MAGEA11P43364 429 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 KCNQ1P51787 676 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 HADHBP55084 474 aaKnown RBP10.6□□□□□ -0.71
NEK9-205ENST00000555405 STXBP5Q5T5C0 1151 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 SPOCD1Q6ZMY3 1216 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 MAP7D3Q8IWC1 876 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 CARD9Q9H257 536 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 DPH5Q9H2P9 285 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 ZNF334Q9HCZ1 680 aaPredicted RBP10.6□□□□□ -0.71
NEK9-205ENST00000555405 ZNF148Q9UQR1 794 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 HCFC2Q9Y5Z7 792 aa10.6□□□□□ -0.71
NEK9-205ENST00000555405 ABLIM3O94929 683 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 HDCP19113 662 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 KDELR1P24390 212 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 TBX4P57082 545 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 ARL13BQ3SXY8 428 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 GRASPQ7Z6J2 395 aaPredicted RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 SLC13A5Q86YT5 568 aaPredicted RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 LRRC1Q9BTT6 524 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 STIM2Q9P246 746 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 R3HDM2Q9Y2K5 976 aaKnown RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 MFHAS1Q9Y4C4 1052 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 CCDC195A0A1B0GUA6 201 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 H7C0C1 242 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 EPHB2P29323 1055 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 ATP5OP48047 213 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 SMARCB1Q12824 385 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 BOLA3Q53S33 107 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 C8orf74Q6P047 294 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 TFAP2DQ7Z6R9 452 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 RNF168Q8IYW5 571 aaPredicted RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 RCOR2Q8IZ40 523 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 CCNYQ8ND76 341 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 MRPS31Q92665 395 aaKnown RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 CD101Q93033 1021 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 TCEAL4Q96EI5 215 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 RBM41Q96IZ5 413 aaKnown RBP10.59□□□□□ -0.71
NEK9-205ENST00000555405 SLC22A12Q96S37 553 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 NPY6RQ99463 290 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 SEPT10Q9P0V9 454 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 VANGL2Q9ULK5 521 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 SCML2Q9UQR0 700 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 RWDD3Q9Y3V2 267 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 TTLL3Q9Y4R7 772 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 USP3Q9Y6I4 520 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 FAM72CH0Y354 149 aa10.59□□□□□ -0.71
NEK9-205ENST00000555405 PSTPIP1O43586 416 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms