RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TAF4BQ92750 862 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 ERLEC1Q96DZ1 483 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 HNRNPABQ99729 332 aaKnown RBP11.14□□□□□ -0.63
SHMT2-215ENST00000554656 HSD3B7Q9H2F3 369 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 FBXO44Q9H4M3 255 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 CD93Q9NPY3 652 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 TMEM9BQ9NQ34 198 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 TLR8Q9NR97 1041 aaKnown RBP11.14□□□□□ -0.63
SHMT2-215ENST00000554656 DEC1Q9P2X7 70 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 NUDT5Q9UKK9 219 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 A0A1W2PQH9 124 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 TBC1D3BA6NDS4 549 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 PRRT4C9JH25 899 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 NEDD8-MDP1E9PL57 170 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 MAPK13O15264 365 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 CILPO75339 1184 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 TOP3BO95985 862 aaKnown RBP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 ACO1P21399 889 aaKnown RBP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 NR2F2P24468 414 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 GCLMP48507 274 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 FANCCQ00597 558 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 LRRC63Q05C16 580 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 TPD52L1Q16890 204 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 ANO4Q32M45 955 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 ZCWPW2Q504Y3 356 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 TRIM61Q5EBN2 209 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 SH3PXD2AQ5TCZ1 1133 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 PEAR1Q5VY43 1037 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 BTBD8Q5XKL5 378 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 KLHL10Q6JEL2 608 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 Q6ZNB5 142 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 LPCAT2Q7L5N7 544 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 ANKRD20A12PQ8NF67 263 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 SEMA4DQ92854 862 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 CYFIP2Q96F07 1278 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 MED15Q96RN5 788 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 NIF3L1Q9GZT8 377 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 POLMQ9NP87 494 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 FSCN3Q9NQT6 498 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 DNAJC17Q9NVM6 304 aaKnown RBP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 FANCLQ9NW38 375 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 MARK1Q9P0L2 795 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 CALCOCO1Q9P1Z2 691 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 BCCIPQ9P287 314 aaKnown RBP eCLIP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 EVLQ9UI08 416 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 CTNND2Q9UQB3 1225 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 MAPK8IP1Q9UQF2 711 aa11.13□□□□□ -0.63
SHMT2-215ENST00000554656 MUC22E2RYF6 1773 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-215ENST00000554656 CALUO43852 315 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-215ENST00000554656 STC2O76061 302 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
SHMT2-215ENST00000554656 KLKB1P03952 638 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 CISD3P0C7P0 127 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 HOXB2P14652 356 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 TYRP14679 529 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 CD58P19256 250 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 NDUFV2P19404 249 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 SPINK2P20155 84 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 ITPKAP23677 461 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 NTSR1P30989 418 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 KIF11P52732 1056 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 ZNF252P-AS1Q0IIN9 211 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 PPP1R26Q5T8A7 1209 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-215ENST00000554656 GRAMD4Q6IC98 578 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 TTI2Q6NXR4 508 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 TPGS1Q6ZTW0 290 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 SYT12Q8IV01 421 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 FAM114A1Q8IWE2 563 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 FAM186BQ8IYM0 893 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 SMYD4Q8IYR2 804 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-215ENST00000554656 DEFB119Q8N690 84 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 BHMTQ93088 406 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 TRIM44Q96DX7 344 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-215ENST00000554656 SPACA7Q96KW9 195 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 ARID3AQ99856 593 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 BBS2Q9BXC9 721 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 NT5C1AQ9BXI3 368 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 NACA2Q9H009 215 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 SLC6A17Q9H1V8 727 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 THAP9Q9H5L6 903 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 MMRN2Q9H8L6 949 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 CYP3A43Q9HB55 503 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 PNPLA8Q9NP80 782 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 PILRBQ9UKJ0 227 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 FRMD4BQ9Y2L6 1034 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 STARD13Q9Y3M8 1113 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 RAD54BQ9Y620 910 aa11.12□□□□□ -0.63
SHMT2-215ENST00000554656 ASPMQ8IZT6 3477 aa11.11□□□□□ -0.63
SHMT2-215ENST00000554656 SPEGQ15772 3267 aa11.11□□□□□ -0.63
SHMT2-215ENST00000554656 IGHV1OR15-9A0A0B4J2B8 117 aa11.11□□□□□ -0.63
SHMT2-215ENST00000554656 LRRC10BA6NIK2 292 aa11.11□□□□□ -0.63
SHMT2-215ENST00000554656 MAP3K13O43283 966 aa11.11□□□□□ -0.63
SHMT2-215ENST00000554656 RARGP13631 454 aa11.11□□□□□ -0.63
SHMT2-215ENST00000554656 ENGP17813 658 aa11.11□□□□□ -0.63
SHMT2-215ENST00000554656 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
SHMT2-215ENST00000554656 CSRP1P21291 193 aaKnown RBP11.11□□□□□ -0.63
SHMT2-215ENST00000554656 EEF1GP26641 437 aaKnown RBP11.11□□□□□ -0.63
SHMT2-215ENST00000554656 ATP5C1P36542 298 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms