RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PEAR1Q5VY43 1037 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 PM20D1Q6GTS8 502 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 SLC36A4Q6YBV0 504 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 CYP2U1Q7Z449 544 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 PIGZQ86VD9 579 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 SYT12Q8IV01 421 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 FAM217AQ8IXS0 508 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 SMYD4Q8IYR2 804 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 SCML4Q8N228 414 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 CPXM2Q8N436 756 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 NAT16Q8N8M0 369 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 SLC35C1Q96A29 364 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 JAKMIP2Q96AA8 810 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 DHTKD1Q96HY7 919 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 ARID3AQ99856 593 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 EDEM2Q9BV94 578 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 MMRN2Q9H8L6 949 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 METTL14Q9HCE5 456 aaKnown RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 CD248Q9HCU0 757 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 OLA1Q9NTK5 396 aaKnown RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 BCCIPQ9P287 314 aaKnown RBP eCLIP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 ARMCX3Q9UH62 379 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 RALYQ9UKM9 306 aaKnown RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 HCN2Q9UL51 889 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 KIAA1257Q9ULG3 409 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 A0A1W2PQF6 199 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TCRBV21S2A2A0A5A6 115 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 PRRT4C9JH25 899 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 PSMA7O14818 248 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 XPO1O14980 1071 aaKnown RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 MDM4O15151 490 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 P4HA2O15460 535 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 ZBTB24O43167 697 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 AP5Z1O43299 807 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 ZBED1O96006 694 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 KLKB1P03952 638 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 PAEPP09466 180 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 VDRP11473 427 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 GABRG2P18507 467 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 CSRP1P21291 193 aaKnown RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 PMLP29590 882 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 DHPSP49366 369 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 PMS1P54277 932 aaKnown RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF445P59923 1031 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 YWHAGP61981 247 aaKnown RBP eCLIP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 BST2Q10589 180 aaKnown RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 LMAN2Q12907 356 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 STIM1Q13586 685 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 CUL2Q13617 745 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 ENPP2Q13822 863 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 SGO2Q562F6 1265 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 DCAF17Q5H9S7 520 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TCERG1LQ5VWI1 586 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 FYB2Q5VWT5 728 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 LYSMD4Q5XG99 296 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 EGFLAMQ63HQ2 1017 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 ANKRD40Q6AI12 368 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TCEAL6Q6IPX3 200 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 SDE2Q6IQ49 451 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 SLC23A3Q6PIS1 610 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TPGS1Q6ZTW0 290 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 RABEPKQ7Z6M1 372 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 METTL3Q86U44 580 aaKnown RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TTC30AQ86WT1 665 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 MIB1Q86YT6 1006 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 CHPFQ8IZ52 775 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 UBR7Q8N806 425 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 HMGB4Q8WW32 186 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 RLN3Q8WXF3 142 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 KCTD13Q8WZ19 329 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TATDN2Q93075 761 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TCEAL3Q969E4 200 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 SMARCE1Q969G3 411 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 PLD4Q96BZ4 506 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 CEP63Q96MT8 703 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 GBP4Q96PP9 640 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 SLC2A11Q9BYW1 496 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 IRX2Q9BZI1 471 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 SMOC1Q9H4F8 434 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TMEM9BQ9NQ34 198 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 MARCH2Q9P0N8 246 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 MBD1Q9UIS9 605 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-203ENST00000554074 STOML2Q9UJZ1 356 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 STRIP2Q9ULQ0 834 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 INVSQ9Y283 1065 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 TMEM131Q92545 1883 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 USP24Q9UPU5 2620 aa6.93□□□□□ -1.3
SLIRP-203ENST00000554074 IGHV1OR15-9A0A0B4J2B8 117 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 BICDL2A1A5D9 508 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 C4orf47A7E2U8 309 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 UPK3BL1B0FP48 263 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 UPK3BL2E5RIL1 263 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 GOLGA6L22H0YM25 854 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 CDX4O14627 284 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-203ENST00000554074 TRIM24O15164 1050 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 MAP3K13O43283 966 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 KCNK5O95279 499 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 LATS1O95835 1130 aa6.92□□□□□ -1.3
SLIRP-203ENST00000554074 SETSIPP0DME0 302 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms