RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 ZNF576Q9H609 170 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 PIDD1Q9HB75 910 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 NMUR1Q9HB89 426 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 ASAH2Q9NR71 780 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 ZDHHC7Q9NXF8 308 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 DNMT3LQ9UJW3 386 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 MRFAP1Q9Y605 127 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 MKI67P46013 3256 aaKnown RBP10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 TMEM265A0A087WTH1 108 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 GOLGA6L10A0A0M3HER8 536 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 LRRD1A4D1F6 860 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 CTAGE15A4D2H0 777 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF840PA6NDX5 716 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 PGRMC1O00264 195 aaKnown RBP10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF197O14709 1029 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 MDM4O15151 490 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 CCL16O15467 120 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 TLR5O60602 858 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 APOEP02649 317 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 CTAGE8P0CG41 777 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 RARAP10276 462 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 EPCAMP16422 314 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 NRIP1P48552 1158 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 TUBP50607 506 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF135P52742 658 aaPredicted RBP10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 TBX4P57082 545 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 TUBB4BP68371 445 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 SLC25A11Q02978 314 aaKnown RBP10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 EFEMP1Q12805 493 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF211Q13398 564 aaPredicted RBP10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 NNTQ13423 1086 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 LONRF2Q1L5Z9 754 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ACBD5Q5T8D3 534 aaPredicted RBP10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 DAB2IPQ5VWQ8 1189 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 CTAGE6Q86UF2 777 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 TAC4Q86UU9 113 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 FAM131BQ86XD5 332 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 CTAGE4Q8IX94 777 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ARFGAP1Q8N6T3 406 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ADAM32Q8TC27 787 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ACTRT1Q8TDG2 376 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 COG1Q8WTW3 980 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 ALG3Q92685 438 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 CASP10Q92851 521 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 RNF25Q96BH1 459 aaPredicted RBP10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 CORO1BQ9BR76 489 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 NSUN3Q9H649 340 aaKnown RBP10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 DZANK1Q9NVP4 752 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 LMCD1Q9NZU5 365 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 MARCH2Q9P0N8 246 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 RASAL2Q9UJF2 1139 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 TLR6Q9Y2C9 796 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 HCFC2Q9Y5Z7 792 aa10.88□□□□□ -0.67
TMEM55B-205ENST00000554028 CCDC195A0A1B0GUA6 201 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 SLC12A8A0AV02 714 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF185O15231 689 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 FANCGO15287 622 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 IRAK2O43187 625 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 TJP3O95049 919 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 SLU7O95391 586 aaKnown RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 F11P03951 625 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 PYGMP11217 842 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 MYL4P12829 197 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 PFKLP17858 780 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 TFE3P19532 575 aaPredicted RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 KDELR1P24390 212 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 GABRR2P28476 465 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 ADRA1BP35368 520 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 ARL4AP40617 200 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 MARCKSL1P49006 195 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 CXCR3P49682 368 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 CDH6P55285 790 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 COG7P83436 770 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 PPP2R5DQ14738 602 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 TRIP4Q15650 581 aaPredicted RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 SMTNL2Q2TAL5 461 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 ARHGAP15Q53QZ3 475 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 KCNT1Q5JUK3 1230 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 KLHDC10Q6PID8 442 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 PDZD4Q76G19 769 aaPredicted RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 CPNE8Q86YQ8 564 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 MIB1Q86YT6 1006 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 CREG2Q8IUH2 290 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 UNC45BQ8IWX7 931 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 RASGEF1CQ8N431 466 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 ATP6V0D2Q8N8Y2 350 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 CMASQ8NFW8 434 aaPredicted RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 NTAN1Q96AB6 310 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 CALN1Q9BXU9 219 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 PRO3102Q9H379 93 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 ATXN3LQ9H3M9 355 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 DHX35Q9H5Z1 703 aaKnown RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 IGFLR1Q9H665 355 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 L2HGDHQ9H9P8 463 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 PIGVQ9NUD9 493 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms