RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SHISA7A6NL88 538 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 TBKBP1A7MCY6 615 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 E7EWF7 191 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 ZNF213O14771 459 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 FIBPO43427 364 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 CAND2O75155 1236 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 CSDE1O75534 798 aaKnown RBP3.59□□□□□ -1.83
SLIRP-202ENST00000553981 FGF18O76093 207 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 TOX4O94842 621 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 STBD1O95210 358 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 NPTXRO95502 500 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 VSIG10L2P0DP72 767 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 MYBP10242 640 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 SCG2P13521 617 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 EPCAMP16422 314 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 NR4A1P22736 598 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 TECP42680 631 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 FNTBP49356 437 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 ROM1Q03395 351 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 WTAPQ15007 396 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 MTHFD1LQ6UB35 978 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 BRAPQ7Z569 592 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 FGD2Q7Z6J4 655 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 VRK3Q8IV63 474 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 CCDC60Q8IWA6 550 aaPredicted RBP3.59□□□□□ -1.83
SLIRP-202ENST00000553981 SMC5Q8IY18 1101 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 MB21D2Q8IYB1 491 aaPredicted RBP3.59□□□□□ -1.83
SLIRP-202ENST00000553981 KIAA0319LQ8IZA0 1049 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 ADSSL1Q8N142 457 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 ZNF276Q8N554 614 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 SLC22A17Q8WUG5 538 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 SEPT1Q8WYJ6 367 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 ESR2Q92731 530 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 APBB2Q92870 758 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 GJA10Q969M2 543 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 E2F7Q96AV8 911 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 LENG9Q96B70 501 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 ADAM2Q99965 735 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 SENP7Q9BQF6 1050 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 RPP25Q9BUL9 199 aaKnown RBP3.59□□□□□ -1.83
SLIRP-202ENST00000553981 MLST8Q9BVC4 326 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 BOCQ9BWV1 1114 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 LRRC2Q9BYS8 371 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 TLE6Q9H808 572 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 KAT14Q9H8E8 782 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 LY9Q9HBG7 655 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 RGS18Q9NS28 235 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 TMEM260Q9NX78 707 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 SFMBT1Q9UHJ3 866 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 TUBE1Q9UJT0 475 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 ST3GAL5Q9UNP4 418 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 NRCAMQ92823 1304 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 KDM3AQ9Y4C1 1321 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 NOTCH4Q99466 2003 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 DOCK8Q8NF50 2099 aa3.59□□□□□ -1.83
SLIRP-202ENST00000553981 ZFHX4Q86UP3 3567 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 IGLV3-22A0A075B6J6 115 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 UBA6A0AVT1 1052 aaPredicted RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 TMEM150BA6NC51 233 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 GOLGA6L6A8MZA4 724 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 FAM86B1E9PN63 330 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 F8W810 466 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 DDX39AO00148 427 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 DVL2O14641 736 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 DHX16O60231 1041 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 DTNBO60941 627 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 MFAP3LO75121 409 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 C22orf31O95567 290 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 LMNAP02545 664 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 VTNP04004 478 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 FAM86B2P0C5J1 330 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 FBLP22087 321 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 KLRC1P26715 233 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 IL12RB1P42701 662 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 ID4P47928 161 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 MECP2P51608 486 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 CLCN3P51790 818 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 KIF11P52732 1056 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 ACTR2P61160 394 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 HDAC1Q13547 482 aaPredicted RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 NEDD9Q14511 834 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 LONRF3Q496Y0 759 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 NAALADL2Q58DX5 795 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 IFIT1BQ5T764 474 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 SLFN12LQ6IEE8 588 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 KCNV1Q6PIU1 500 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 ABHD15Q6UXT9 468 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 TAS1R1Q7RTX1 841 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 SUGP1Q8IWZ8 645 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 SLC39A11Q8N1S5 342 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 MDGA1Q8NFP4 955 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 CRYGNQ8WXF5 182 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 RIN2Q8WYP3 895 aaPredicted RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 MRPS27Q92552 414 aaKnown RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 GPATCH3Q96I76 525 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 DYDC2Q96IM9 177 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 ZNF512Q96ME7 567 aaPredicted RBP3.58□□□□□ -1.84
SLIRP-202ENST00000553981 WDR92Q96MX6 357 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 SH2D3AQ9BRG2 576 aa3.58□□□□□ -1.84
SLIRP-202ENST00000553981 UPF3BQ9BZI7 483 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms