RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 MARCH2Q9P0N8 246 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 RASAL2Q9UJF2 1139 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 USTQ9Y2C2 406 aa15.11■□□□□ 0.01
SHMT2-210ENST00000553950 MDM4O15151 490 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 OLFM2O95897 454 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 FTCDO95954 541 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 TNNT1P13805 278 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 CCR1P32246 355 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 ZNF135P52742 658 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-210ENST00000553950 HDAC4P56524 1084 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 COG7P83436 770 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 NME3Q13232 169 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 ADAM15Q13444 863 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 PPP2R5DQ14738 602 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 COL19A1Q14993 1142 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 TRIP4Q15650 581 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-210ENST00000553950 CLUL1Q15846 466 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 C15orf59Q2T9L4 293 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-210ENST00000553950 MEI1Q5TIA1 1274 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 SYPL2Q5VXT5 272 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 CC2D1AQ6P1N0 951 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-210ENST00000553950 GPR149Q86SP6 731 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 KIF18AQ8NI77 898 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 PLD4Q96BZ4 506 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 LRCH3Q96II8 777 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 RBM41Q96IZ5 413 aaKnown RBP15.1■□□□□ 0.01
SHMT2-210ENST00000553950 OSER1Q9NX31 292 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHMT2-210ENST00000553950 DNMT3BQ9UBC3 853 aaKnown RBP15.1■□□□□ 0.01
SHMT2-210ENST00000553950 SLC12A6Q9UHW9 1150 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 USP18Q9UMW8 372 aa15.1■□□□□ 0.01
SHMT2-210ENST00000553950 A0A1W2PRU2 124 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 TCP1P17987 556 aaKnown RBP15.09■□□□□ 0.01
SHMT2-210ENST00000553950 MIPP30301 263 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 MTHFRP42898 656 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 RWDD2BP57060 319 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 SLC25A11Q02978 314 aaKnown RBP15.09■□□□□ 0.01
SHMT2-210ENST00000553950 SCAPQ12770 1279 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 EFEMP1Q12805 493 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 CTC1Q2NKJ3 1217 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 BOLA3Q53S33 107 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 EFHC2Q5JST6 749 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 RARS2Q5T160 578 aaKnown RBP15.09■□□□□ 0.01
SHMT2-210ENST00000553950 TMC5Q6UXY8 1006 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 GAREM2Q75VX8 874 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 VSIG1Q86XK7 387 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 UNC45BQ8IWX7 931 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 CD101Q93033 1021 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 RNF34Q969K3 372 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 HES6Q96HZ4 224 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 NECTIN4Q96NY8 510 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 IRX2Q9BZI1 471 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-210ENST00000553950 TASP1Q9H6P5 420 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 CCSER2Q9H7U1 834 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 KIF9Q9HAQ2 790 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 TRPC7Q9HCX4 862 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHMT2-210ENST00000553950 CLDND1Q9NY35 253 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 MRPS23Q9Y3D9 190 aaKnown RBP15.09■□□□□ 0.01
SHMT2-210ENST00000553950 HYOU1Q9Y4L1 999 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 DOCK6Q96HP0 2047 aa15.09■□□□□ 0.01
SHMT2-210ENST00000553950 CES2O00748 559 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 COCHO43405 550 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 LATS1O95835 1130 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 CKMP06732 381 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 MBL2P11226 248 aaPredicted RBP15.08■□□□□ 0
SHMT2-210ENST00000553950 HTR7P34969 479 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 0
SHMT2-210ENST00000553950 AVPR1AP37288 418 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 CXCR3P49682 368 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 TBX4P57082 545 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 TUBB2AQ13885 445 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 ADGRE1Q14246 886 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 PRSS36Q5K4E3 855 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 ZFYVE27Q5T4F4 411 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 OTUD1Q5VV17 481 aaPredicted RBP15.08■□□□□ 0
SHMT2-210ENST00000553950 SCYL2Q6P3W7 929 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 SYT10Q6XYQ8 523 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 GRASPQ7Z6J2 395 aaPredicted RBP15.08■□□□□ 0
SHMT2-210ENST00000553950 TMEM150AQ86TG1 271 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 MAP7D3Q8IWC1 876 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 KATNAL2Q8IYT4 538 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 HS6ST3Q8IZP7 471 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 ATP6V0D2Q8N8Y2 350 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 SHKBP1Q8TBC3 707 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 TUBB2BQ9BVA1 445 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 DCLK3Q9C098 648 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 CARD9Q9H257 536 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 ADAM7Q9H2U9 754 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 GOLPH3Q9H4A6 298 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 SLITRK6Q9H5Y7 841 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 WDCPQ9H6R7 721 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 PIGVQ9NUD9 493 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 HCFC1R1Q9NWW0 138 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 LSM7Q9UK45 103 aaKnown RBP15.08■□□□□ 0
SHMT2-210ENST00000553950 PCDHA3Q9Y5H8 950 aa15.08■□□□□ 0
SHMT2-210ENST00000553950 SYNJ2BP-COX16A0A087WUM0 186 aa15.07■□□□□ 0
SHMT2-210ENST00000553950 SLC12A8A0AV02 714 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms