RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SYF2O95926 243 aaKnown RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 MBPP02686 304 aaPredicted RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 CD63P08962 238 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 TBXAS1P24557 533 aaPredicted RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 HOXA7P31268 230 aaPredicted RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 HOXA11P31270 313 aaPredicted RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 PRKAR1BP31321 381 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 RAB27AP51159 221 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 HILS1P60008 231 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 LTBQ06643 244 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 KPNB1Q14974 876 aaKnown RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 ZRSR2Q15696 482 aaKnown RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 NFE2Q16621 373 aaPredicted RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 PFKFB3Q16875 520 aaPredicted RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 TTLL5Q6EMB2 1281 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 PDXDC1Q6P996 788 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 B4GALNT4Q76KP1 1039 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 C11orf96Q7Z7L8 435 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 NEUROG1Q92886 237 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 CGRRF1Q99675 332 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 NTPCRQ9BSD7 190 aaKnown RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 NUAK2Q9H093 628 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 ARMT1Q9H993 441 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 CD93Q9NPY3 652 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 PIH1D1Q9NWS0 290 aaKnown RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 TERF2IPQ9NYB0 399 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 NCKIPSDQ9NZQ3 722 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 ZIM2Q9NZV7 527 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 STXBP5LQ9Y2K9 1186 aa2.8□□□□□ -1.96
SRP54-204ENST00000553923 LUC7L2Q9Y383 392 aaKnown RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 SIRT4Q9Y6E7 314 aaPredicted RBP2.8□□□□□ -1.96
SRP54-204ENST00000553923 A0A0U1RQG5 324 aaPredicted RBP2.79□□□□□ -1.96
SRP54-204ENST00000553923 SLC22A23A1A5C7 686 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 A8MVJ9 347 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 EXOC5O00471 708 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 TNFRSF13BO14836 293 aaPredicted RBP2.79□□□□□ -1.96
SRP54-204ENST00000553923 NPHP1O15259 732 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 PRAMEF2O60811 474 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 CT47B1P0C2W7 299 aaPredicted RBP2.79□□□□□ -1.96
SRP54-204ENST00000553923 CD19P15391 556 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 AKAP5P24588 427 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 CDC25AP30304 524 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 RAB1AP62820 205 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 PPATQ06203 517 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 LMOD3Q0VAK6 560 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 NFATC4Q14934 902 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 ATAT1Q5SQI0 421 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 KCTD20Q7Z5Y7 419 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 ZBTB46Q86UZ6 589 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 NR2C2APQ86WQ0 139 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 FBXL14Q8N1E6 418 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 METTL25Q8N6Q8 603 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 PAF1Q8N7H5 531 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 PNPLA1Q8N8W4 532 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 SLC44A5Q8NCS7 719 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 MAML1Q92585 1016 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 ATP2A3Q93084 1043 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 HPS3Q969F9 1004 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 MTFMTQ96DP5 389 aaKnown RBP2.79□□□□□ -1.96
SRP54-204ENST00000553923 HSPBAP1Q96EW2 488 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 MED30Q96HR3 178 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 FCRL5Q96RD9 977 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 ARPC5LQ9BPX5 153 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 PCGF6Q9BYE7 350 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 TMX4Q9H1E5 349 aaPredicted RBP2.79□□□□□ -1.96
SRP54-204ENST00000553923 ARNT2Q9HBZ2 717 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 STAP2Q9UGK3 403 aa2.79□□□□□ -1.96
SRP54-204ENST00000553923 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 CLEC18AA5D8T8 446 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 PODXLO00592 558 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 SRGAP2O75044 1071 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 NBPF7P0C2Y1 421 aaPredicted RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 VCAM1P19320 739 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 RPS6KB1P23443 525 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 NEK2P51955 445 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 RPL36AP83881 106 aaKnown RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 MCL1Q07820 350 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 FGL2Q14314 439 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 KRTAP24-1Q3LI83 254 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 C10orf62Q5T681 223 aaPredicted RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 WDR78Q5VTH9 848 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 NUGGCQ68CJ6 796 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 FOXP4Q8IVH2 680 aaPredicted RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 CLEC18CQ8NCF0 446 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 LMO3Q8TAP4 145 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 OIT3Q8WWZ8 545 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 JPH3Q8WXH2 748 aaPredicted RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 CHMP4CQ96CF2 233 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 HOOK2Q96ED9 719 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 MAP3K14Q99558 947 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 NAP1L4Q99733 375 aaKnown RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 PPCSQ9HAB8 311 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 PAPOLBQ9NRJ5 636 aaKnown RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 CNNM1Q9NRU3 951 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 ZSCAN32Q9NX65 697 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.78□□□□□ -1.96
SRP54-204ENST00000553923 ZNF180Q9UJW8 692 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 RIMKLBQ9ULI2 386 aa2.78□□□□□ -1.96
SRP54-204ENST00000553923 GOLGA6CA6NDK9 693 aa2.77□□□□□ -1.97
SRP54-204ENST00000553923 GOLGA6BA6NDN3 693 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms