RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CCDC22O60826 627 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 L1CAMP32004 1257 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 MDH1BQ5I0G3 518 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 DENND5BQ6ZUT9 1274 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 APBB1IPQ7Z5R6 666 aaPredicted RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 IFNLR1Q8IU57 520 aaPredicted RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 ARID3BQ8IVW6 561 aaPredicted RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 CCDC185Q8N715 623 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 PTCD3Q96EY7 689 aaKnown RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 FAM167BQ9BTA0 163 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 EIF2AQ9BY44 585 aaKnown RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 CEP41Q9BYV8 373 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 PNPLA8Q9NP80 782 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 MTO1Q9Y2Z2 717 aaKnown RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 PLLPQ9Y342 182 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 DPYSL4O14531 572 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 GNAZP19086 355 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 PRKCHP24723 683 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 CHI3L2Q15782 390 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 SOWAHAQ2M3V2 549 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 KHDC1Q4VXA5 237 aaKnown RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 CASC4Q6P4E1 433 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 ZCCHC23Q6ZST2 131 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 NDUFAF2Q8N183 169 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 MIEF2Q96C03 454 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 OXNAD1Q96HP4 312 aaPredicted RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 TBCBQ99426 244 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 BTBD10Q9BSF8 475 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 ADARB2Q9NS39 739 aaKnown RBP15.08■□□□□ 0
ACTN1-211ENST00000553882 AP4E1Q9UPM8 1137 aa15.08■□□□□ 0
ACTN1-211ENST00000553882 BRCA2P51587 3418 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 SYNJ2BP-COX16A0A087WUM0 186 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 HMX2A2RU54 273 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 I3L4J1 428 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 FCHO1O14526 889 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 DESP17661 470 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 SPDYAQ5MJ70 313 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 MARCH8Q5T0T0 291 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 BSPRYQ5W0U4 402 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 MAMDC4Q6UXC1 1216 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 RINLQ6ZS11 566 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 PPTC7Q8NI37 304 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 NDRG1Q92597 394 aaKnown RBP15.07■□□□□ 0
ACTN1-211ENST00000553882 NSL1Q96IY1 281 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 SIGLEC10Q96LC7 697 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 COX16Q9P0S2 106 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 GJD2Q9UKL4 321 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 SKAP2O75563 359 aaPredicted RBP15.07■□□□□ 0
ACTN1-211ENST00000553882 ESRRAP11474 423 aaPredicted RBP15.07■□□□□ 0
ACTN1-211ENST00000553882 GOT1P17174 413 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 AMPD1P23109 780 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 AKAP5P24588 427 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 LMO2P25791 158 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 ADORA2AP29274 412 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 PTDSS1P48651 473 aaKnown RBP15.07■□□□□ 0
ACTN1-211ENST00000553882 STILQ15468 1287 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 GRIK4Q16099 956 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 ZNF618Q5T7W0 954 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 LGSNQ5TDP6 509 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 C4orf50Q6ZRC1 276 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 CDKL3Q8IVW4 592 aaPredicted RBP15.07■□□□□ 0
ACTN1-211ENST00000553882 GSDMBQ8TAX9 411 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 MCUR1Q96AQ8 359 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 CSPG4P5Q96PW8 444 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 LGMNQ99538 433 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 C20orf27Q9GZN8 174 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 TLE6Q9H808 572 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 KCNH4Q9UQ05 1017 aa15.07■□□□□ 0
ACTN1-211ENST00000553882 GSC2O15499 205 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 KRT38O76015 456 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 TGDSO95455 350 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 GRM5P41594 1212 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 ERFP50548 548 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 KYAT1Q16773 422 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 HEATR6Q6AI08 1181 aaKnown RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 RFX8Q6ZV50 586 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 FAM131BQ86XD5 332 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 DEPDC1BQ8WUY9 529 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 E2F7Q96AV8 911 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 KCTD15Q96SI1 283 aaPredicted RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 EBNA1BP2Q99848 306 aaKnown RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 FRMD8Q9BZ67 464 aaPredicted RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 NXF3Q9H4D5 531 aaKnown RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 CDHR5Q9HBB8 845 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 TMPRSS4Q9NRS4 437 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 SETD4Q9NVD3 440 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 MTMR10Q9NXD2 777 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 TAS2R1Q9NYW7 299 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 DTLQ9NZJ0 730 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 ZNF180Q9UJW8 692 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 TRDMT1O14717 391 aaKnown RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 STAU1O95793 577 aaKnown RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 HOXA11P31270 313 aaPredicted RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 SLC8A3P57103 927 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 KPNB1Q14974 876 aaKnown RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 DPYSL2Q16555 572 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 HSF5Q4G112 596 aaPredicted RBP15.06■□□□□ 0
ACTN1-211ENST00000553882 WASHC2DQ5SRD0 308 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 NUDCD3Q8IVD9 361 aa15.06■□□□□ 0
ACTN1-211ENST00000553882 TTC39CQ8N584 583 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms