RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ZNF268Q14587 947 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-208ENST00000553868 NFE2Q16621 373 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-208ENST00000553868 PLEKHA7Q6IQ23 1121 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 FAM171BQ6P995 826 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 ANKS3Q6ZW76 656 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 TTC30AQ86WT1 665 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 CEP57Q86XR8 500 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 ZDHHC17Q8IUH5 632 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 FUKQ8N0W3 1084 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 ZNF564Q8TBZ8 553 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-208ENST00000553868 HSFY1Q96LI6 401 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 WDR24Q96S15 920 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 DUSP16Q9BY84 665 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 PLEKHA4Q9H4M7 779 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 CRTAC1Q9NQ79 661 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 ST7Q9NRC1 585 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 SALL4Q9UJQ4 1053 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 CAPN6Q9Y6Q1 641 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 ADAMTS20P59510 1910 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 TMEM8BA6NDV4 472 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 XPO1O14980 1071 aaKnown RBP15.16■□□□□ 0.02
SHMT2-208ENST00000553868 FOXD2O60548 495 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-208ENST00000553868 ATP2C2O75185 946 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 GABRB2P47870 512 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 CCR3P51677 355 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 PDE4CQ08493 712 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 ZNF252P-AS1Q0IIN9 211 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 SMARCB1Q12824 385 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 USP41Q3LFD5 358 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 PTPN20Q4JDL3 420 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 CTXN3Q4LDR2 81 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 C11orf63Q6NUN7 778 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 LILRA6Q6PI73 481 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 DAAM2Q86T65 1068 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 FAM35AQ86V20 835 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 C3orf20Q8ND61 904 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 HDAC7Q8WUI4 952 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 SLC35F5Q8WV83 523 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 SMARCD1Q96GM5 515 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 TTPALQ9BTX7 342 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 SELENOOQ9BVL4 669 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 SCNM1Q9BWG6 230 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 SLC4A5Q9BY07 1137 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 B3GNT5Q9BYG0 378 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 GPR62Q9BZJ7 368 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 LMAN1LQ9HAT1 526 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 MRPS17Q9Y2R5 130 aaKnown RBP15.16■□□□□ 0.02
SHMT2-208ENST00000553868 FREM2Q5SZK8 3169 aa15.16■□□□□ 0.02
SHMT2-208ENST00000553868 NAV2Q8IVL1 2488 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 MYBPHLA2RUH7 354 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 GRID2IPA4D2P6 1211 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 MYO1FO00160 1098 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-208ENST00000553868 ZMYND10O75800 440 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 AP1G2O75843 785 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 PLA2G4AP47712 749 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 CXCL12P48061 93 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 MAMLD1Q13495 774 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 MRPL58Q14197 206 aaKnown RBP15.15■□□□□ 0.02
SHMT2-208ENST00000553868 PPP2R5DQ14738 602 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 DCUN1D2Q6PH85 259 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 C19orf48Q6RUI8 117 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 POTEHQ6S545 545 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 CEP68Q76N32 757 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 SPATA2LQ8IUW3 424 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-208ENST00000553868 OR10T2Q8NGX3 314 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 ING5Q8WYH8 240 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 MYLPFQ96A32 169 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 PCED1BQ96HM7 432 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 CPXM1Q96SM3 734 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 UBXN6Q9BZV1 441 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 ZCWPW1Q9H0M4 648 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 OSGEPQ9NPF4 335 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 KRT82Q9NSB4 513 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 C2orf42Q9NWW7 574 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 ANAPC7Q9UJX3 599 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 NOTCH4Q99466 2003 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 BPTFQ12830 3046 aa15.15■□□□□ 0.02
SHMT2-208ENST00000553868 CELSR3Q9NYQ7 3312 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 FAM170AA1A519 330 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 CCL16O15467 120 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 BUB1BO60566 1050 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-208ENST00000553868 URI1O94763 535 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-208ENST00000553868 EFEMP2O95967 443 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 ZNF806P0C7X5 589 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 DESP17661 470 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 SCNN1AP37088 669 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 DSG1Q02413 1049 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 TCEAL6Q6IPX3 200 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 MAMSTRQ6ZN01 415 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 PEX26Q7Z412 305 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 SLFN11Q7Z7L1 901 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 TMEM110Q86TL2 294 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 RNF168Q8IYW5 571 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-208ENST00000553868 LRRC57Q8N9N7 239 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 KCTD13Q8WZ19 329 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 TCEAL3Q969E4 200 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 FUBP3Q96I24 572 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHMT2-208ENST00000553868 PKMYT1Q99640 499 aa15.14■□□□□ 0.01
SHMT2-208ENST00000553868 LPIN3Q9BQK8 851 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms