RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 OAS1P00973 400 aaKnown RBP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 SERPINC1P01008 464 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 RARGP13631 454 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 LCP1P13796 627 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 AOC1P19801 751 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 AVPR2P30518 371 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 MAGEA9P43362 315 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 PLA2G4AP47712 749 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 TKTL1P51854 596 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 KIF11P52732 1056 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 COPB1P53618 953 aaKnown RBP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 MLLT6P55198 1093 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 STARD6P59095 220 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 PRR20EP86478 221 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 PRR20CP86479 221 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 PRR20DP86480 221 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 PRR20BP86481 221 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 PRR20AP86496 221 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 UBXN1Q04323 297 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 RUNX3Q13761 415 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 LRRC32Q14392 662 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 SYCP1Q15431 976 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 MEA1Q16626 185 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 C10orf120Q5SQS8 335 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 SNX30Q5VWJ9 437 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 CCDC186Q7Z3E2 898 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 RALGPS2Q86X27 583 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 FMNL3Q8IVF7 1028 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 CYP4X1Q8N118 509 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 UBR7Q8N806 425 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 KIAA1958Q8N8K9 716 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 MSANTD4Q8NCY6 345 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 CCDC26Q8TAB7 109 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 OSCP1Q8WVF1 389 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 FAM3CQ92520 227 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 SECISBP2LQ93073 1101 aaKnown RBP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 KREMEN1Q96MU8 473 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 TRIM62Q9BVG3 475 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 SYNCQ9H7C4 482 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 C11orf16Q9NQ32 467 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 OLA1Q9NTK5 396 aaKnown RBP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 TMEM30AQ9NV96 361 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 CLIC5Q9NZA1 410 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 LIMA1Q9UHB6 759 aaKnown RBP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 DNMT3LQ9UJW3 386 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 A0A1W2PQH9 124 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 E2F8A0AVK6 867 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 TTC24A2A3L6 582 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-209ENST00000553855 KRBA1A5PL33 1030 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 FAM170BA6NMN3 283 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 LGALS16A8MUM7 142 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 HHLA1C9JL84 531 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 RNF225M0QZC1 329 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-209ENST00000553855 COCHO43405 550 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 RECKO95980 971 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 PDGFBP01127 241 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-209ENST00000553855 TPM3P06753 285 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 ZDHHC11BP0C7U3 371 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 CCDC172P0C7W6 258 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 IRF1P10914 325 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 RGS7P49802 495 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 ZNF132P52740 706 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 YWHAGP61981 247 aaKnown RBP eCLIP8.74□□□□□ -1.01
PSEN1-209ENST00000553855 COG7P83436 770 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 ADIGQ0VDE8 80 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 GRSF1Q12849 480 aaKnown RBP eCLIP8.74□□□□□ -1.01
PSEN1-209ENST00000553855 PPP2R5DQ14738 602 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 ZNF77Q15935 545 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 PREPLQ4J6C6 727 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-209ENST00000553855 MIIPQ5JXC2 388 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 KLHDC7AQ5VTJ3 777 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 GJB7Q6PEY0 223 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 KLHDC10Q6PID8 442 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 GPRIN1Q7Z2K8 1008 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 CACNA2D4Q7Z3S7 1137 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 TTC30AQ86WT1 665 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 TTC8Q8TAM2 541 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
PSEN1-209ENST00000553855 ZNF606Q8WXB4 792 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 KCTD13Q8WZ19 329 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 IRGQQ8WZA9 623 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 SHC3Q92529 594 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 OTUB2Q96DC9 234 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 RSPRY1Q96DX4 576 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 ZFYVE19Q96K21 471 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 DMRTB1Q96MA1 342 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 OSBPL6Q9BZF3 934 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 ULBP1Q9BZM6 244 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 DCLK3Q9C098 648 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 MIS12Q9H081 205 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 EBF3Q9H4W6 596 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 CCSER2Q9H7U1 834 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 LTB4R2Q9NPC1 389 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 PLCB1Q9NQ66 1216 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 CNGB3Q9NQW8 809 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 CFAP97Q9P2B7 532 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 RAPGEFL1Q9UHV5 662 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 RASAL2Q9UJF2 1139 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 NDRG2Q9UN36 371 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms