RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 DDIT4Q9NX09 232 aa8.38□□□□□ -1.07
SNRPN-206ENST00000553597 CNOT8Q9UFF9 292 aaKnown RBP8.38□□□□□ -1.07
SNRPN-206ENST00000553597 FBXL21Q9UKT6 434 aa8.38□□□□□ -1.07
SNRPN-206ENST00000553597 ARHGAP26Q9UNA1 814 aa8.38□□□□□ -1.07
SNRPN-206ENST00000553597 SORCS3Q9UPU3 1222 aa8.38□□□□□ -1.07
SNRPN-206ENST00000553597 ZFP37Q9Y6Q3 630 aaPredicted RBP8.38□□□□□ -1.07
SNRPN-206ENST00000553597 NYNRINQ9P2P1 1898 aaKnown RBP8.38□□□□□ -1.07
SNRPN-206ENST00000553597 FAM86C2PA6NEL3 165 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 SOWAHDA6NJG2 315 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TMEM110-MUSTN1A8MSY1 372 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 M0QYT0 321 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TSPAN3O60637 253 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 HSF2BPO75031 334 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 RTN2O75298 545 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 STC2O76061 302 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 OLFM2O95897 454 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TRUB2O95900 331 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 PSMC3P17980 439 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 CORO1AP31146 461 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 GABRB2P47870 512 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 RPL34P49207 117 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TUBP50607 506 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 ATXN1P54253 815 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TBX4P57082 545 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 YWHAZP63104 245 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 GPC5P78333 572 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 SLC7A9P82251 487 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 PTP4A2Q12974 167 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TDGQ13569 410 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 C15orf59Q2T9L4 293 aaPredicted RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 RAB6CQ53S08 254 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 EFHC1Q5JVL4 640 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 SNX30Q5VWJ9 437 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 MSANTD2Q6P1R3 559 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 ALKBH5Q6P6C2 394 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 SLC26A9Q7LBE3 791 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TADA2BQ86TJ2 420 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 PHF13Q86YI8 300 aaPredicted RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 DENND1CQ8IV53 801 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 MFSD6LQ8IWD5 586 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 BBS7Q8IWZ6 715 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 SCML4Q8N228 414 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 CSGALNACT1Q8TDX6 532 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 ARHGEF26Q96DR7 871 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 CCDC42Q96M95 316 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 KLF16Q9BXK1 252 aaPredicted RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TRIM7Q9C029 511 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 RAB6CQ9H0N0 254 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 THAP2Q9H0W7 228 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 NHEJ1Q9H9Q4 299 aaPredicted RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 THG1LQ9NWX6 298 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 DUS2Q9NX74 493 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 GTSE1Q9NYZ3 720 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 CLIC5Q9NZA1 410 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 IGSF9Q9P2J2 1179 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 LSM7Q9UK45 103 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 TFR2Q9UP52 801 aa8.37□□□□□ -1.07
SNRPN-206ENST00000553597 BZW2Q9Y6E2 419 aaKnown RBP8.37□□□□□ -1.07
SNRPN-206ENST00000553597 DOCK4Q8N1I0 1966 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 ANKRD62A6NC57 917 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 IRAK2O43187 625 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 CD72P21854 359 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 HNRNPH3P31942 346 aaKnown RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 GJC1P36383 396 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 NUMBP49757 651 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 MRE11P49959 708 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 KPNA1P52294 538 aaPredicted RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 GALCP54803 685 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 RPL7AP62424 266 aaKnown RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 CDK17Q00537 523 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 DEUP1Q05D60 604 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 ZNF268Q14587 947 aaPredicted RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 TRIP4Q15650 581 aaPredicted RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 ZC3H12AQ5D1E8 599 aaKnown RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 SH3PXD2AQ5TCZ1 1133 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 OTUD1Q5VV17 481 aaPredicted RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 DAB2IPQ5VWQ8 1189 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 NAIF1Q69YI7 327 aaPredicted RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 DCUN1D2Q6PH85 259 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 TPGS1Q6ZTW0 290 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 DDX42Q86XP3 938 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 C3orf20Q8ND61 904 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 DEPDC1BQ8WUY9 529 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 RXFP2Q8WXD0 754 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 SERPINB11Q96P15 392 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 SLC2A13Q96QE2 648 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 CDK5RAP1Q96SZ6 601 aaKnown RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 LINC00597Q9H2U6 94 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 OCEL1Q9H607 264 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 TRPV4Q9HBA0 871 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 HPS4Q9NQG7 708 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 HEBP1Q9NRV9 189 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 CALCOCO1Q9P1Z2 691 aa8.36□□□□□ -1.07
SNRPN-206ENST00000553597 XPO7Q9UIA9 1087 aaKnown RBP8.36□□□□□ -1.07
SNRPN-206ENST00000553597 ZMYM5Q9UJ78 669 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms