RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 KLHL30Q0D2K2 578 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TRIM71Q2Q1W2 868 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 CNPY1Q3B7I2 92 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PDCD4Q53EL6 469 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 CT83Q5H943 113 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 POMZP3Q6PJE2 187 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 UNC5AQ6ZN44 842 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 MIER3Q7Z3K6 550 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TMTC1Q8IUR5 882 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PPIL6Q8IXY8 311 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GSPT2Q8IYD1 628 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 AOPEPQ8N6M6 819 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 DTX3Q8N9I9 347 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CSGALNACT1Q8TDX6 532 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CHTF18Q8WVB6 975 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PRPF31Q8WWY3 499 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 PHKBQ93100 1093 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SH3KBP1Q96B97 665 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 MOGAT1Q96PD6 335 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 USP28Q96RU2 1077 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 FAM192AQ9GZU8 254 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 KIAA1586Q9HCI6 787 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 XAB2Q9HCS7 855 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 FARSBQ9NSD9 589 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 SELENONQ9NZV5 590 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 IFNKQ9P0W0 207 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 LARSQ9P2J5 1176 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 MTRRQ9UBK8 725 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 HMGXB4Q9UGU5 601 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 RAB21Q9UL25 225 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SPEF1Q9Y4P9 236 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TELO2Q9Y4R8 837 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PCDHA13Q9Y5I0 950 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 COMMD3-BMI1R4GMX3 469 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ABCB11O95342 1321 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 FLT1P17948 1338 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 H7C1D1 291 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 M0QX08 132 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 FCHO1O14526 889 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ASAP2O43150 1006 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 DKC1O60832 514 aaKnown RBP eCLIP4.18□□□□□ -1.74
RDH11-204ENST00000553578 TBX18O95935 607 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 FAM107AO95990 144 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SLC7A1P30825 629 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SRSF2Q01130 221 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 NFIAQ12857 509 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SGSM1Q2NKQ1 1148 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SWSAP1Q6NVH7 229 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CORO6Q6QEF8 472 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PPP1R21Q6ZMI0 780 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 RFPL4BQ6ZWI9 263 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PDZD4Q76G19 769 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 CHST3Q7LGC8 479 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 APTXQ7Z2E3 356 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 PATL1Q86TB9 770 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 GALNT13Q8IUC8 556 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 STKLD1Q8NE28 680 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CALML6Q8TD86 181 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ST7LQ8TDW4 575 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NLRP4Q96MN2 994 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TUBGCP5Q96RT8 1024 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 HEPHQ9BQS7 1158 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NT5C1AQ9BXI3 368 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CALN1Q9BXU9 219 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 FOXP3Q9BZS1 431 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CUEDC2Q9H467 287 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SERHL2Q9H4I8 314 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 BLOC1S4Q9NUP1 217 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 RIC8BQ9NVN3 520 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 UCKL1Q9NWZ5 548 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TAB2Q9NYJ8 693 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 APEX2Q9UBZ4 518 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 VPS28Q9UK41 221 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PPP2R2CQ9Y2T4 447 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 SCN4AP35499 1836 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 KLF18A0A0U1RQI7 1052 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 KRT87PA6NCN2 255 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CFAP73A6NFT4 308 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 LRRIQ4A6NIV6 560 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 MATN2O00339 956 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 FBP2O00757 339 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TPP1O14773 563 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 MTSS1O43312 755 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PRLP01236 227 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 NPR3P17342 541 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 MUTP22033 750 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 CSTF2P33240 577 aaKnown RBP eCLIP4.18□□□□□ -1.74
RDH11-204ENST00000553578 IGFALSP35858 605 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PBX1P40424 430 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GYG1P46976 350 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 RXRGP48443 463 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 HARS2P49590 506 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 METAP2P50579 478 aaKnown RBP eCLIP4.18□□□□□ -1.74
RDH11-204ENST00000553578 RPP30P78346 268 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 PURAQ00577 322 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 KIF5AQ12840 1032 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 TBX2Q13207 712 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 DCTN2Q13561 401 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 ARL13BQ3SXY8 428 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms