RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TRAPPC10P48553 1259 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ACADVLP49748 655 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 TPMTP51580 245 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 GABREP78334 506 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 TSPY1Q01534 308 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 KDSRQ06136 332 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 CBLBQ13191 982 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 DNAJC3Q13217 504 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 KYAT1Q16773 422 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 GAB4Q2WGN9 574 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 SLC10A6Q3KNW5 377 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 LINC00303Q3SY05 128 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ZNF568Q3ZCX4 644 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 HS1BP3Q53T59 392 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 KDM7AQ6ZMT4 941 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ZNF438Q7Z4V0 828 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 TMPRSS6Q8IU80 811 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 RELL1Q8IUW5 271 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 EID2Q8N6I1 236 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 TTC9BQ8N6N2 239 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 NAT16Q8N8M0 369 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ZSCAN1Q8NBB4 408 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 RIN3Q8TB24 985 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 PIGOQ8TEQ8 1089 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 SNX19Q92543 992 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 PRCCQ92733 491 aaPredicted RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 SIPA1Q96FS4 1042 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 EAF1Q96JC9 268 aaPredicted RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 VCPIP1Q96JH7 1222 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 DEPDC7Q96QD5 511 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 XPO6Q96QU8 1125 aaKnown RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ACO2Q99798 780 aaKnown RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 GABRG3Q99928 467 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ACE2Q9BYF1 805 aaPredicted RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 LRRC2Q9BYS8 371 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 TRIM55Q9BYV6 548 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 CCDC113Q9H0I3 377 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ABCG4Q9H172 646 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 SLC25A18Q9H1K4 315 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 PTPRHQ9HD43 1115 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 NPHS2Q9NP85 383 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 KCNMB3Q9NPA1 279 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ZDHHC4Q9NPG8 344 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ABI2Q9NYB9 513 aaPredicted RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 USP36Q9P275 1121 aaKnown RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 KLHL42Q9P2K6 505 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ORC3Q9UBD5 711 aaPredicted RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 EFR3BQ9Y2G0 817 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 USP20Q9Y2K6 914 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 RBM8AQ9Y5S9 174 aaKnown RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 KCNMB2Q9Y691 235 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ADAMTS9Q9P2N4 1935 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 VPS37CA5D8V6 355 aaPredicted RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 ADAMTS3O15072 1205 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 VILLO15195 856 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CCNT1O60563 726 aaKnown RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 GREM1O60565 184 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 USP12O75317 370 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 TULP3O75386 442 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 NOL4O94818 638 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CD2BP2O95400 341 aaKnown RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CYP11A1P05108 521 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 MPOP05164 745 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CD27P26842 260 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CDC27P30260 824 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 GPC1P35052 558 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 TXLNAP40222 546 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CTSKP43235 329 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 IDH3AP50213 366 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 ARSDP51689 593 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 BCAT1P54687 386 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CLDN6P56747 220 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 SLC7A9P82251 487 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 NFKB2Q00653 900 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 INSM1Q01101 510 aaPredicted RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 MYL7Q01449 175 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 ST3GAL1Q11201 340 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 SFSWAPQ12872 951 aaKnown RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 HDAC1Q13547 482 aaPredicted RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 TRIP4Q15650 581 aaPredicted RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 ANO4Q32M45 955 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 ZC2HC1CQ53FD0 456 aaPredicted RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 ARSHQ5FYA8 562 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 LY6G5CQ5SRR4 150 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 GRAMD4Q6IC98 578 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 IGF2-ASQ6U949 168 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 KIAA0907Q7Z7F0 614 aaPredicted RBP5.51□□□□□ -1.53
CKAP4-203ENST00000553039 LRRTM3Q86VH5 581 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CHD1LQ86WJ1 897 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 CD302Q8IX05 232 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 BLIDQ8IZY5 108 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 ARL14Q8N4G2 192 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 TERB1Q8NA31 727 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 SAP25Q8TEE9 199 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 UCMAQ8WVF2 138 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 KIFAP3Q92845 792 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 PMEPA1Q969W9 287 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 MOCOSQ96EN8 888 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 SGF29Q96ES7 293 aa5.51□□□□□ -1.53
CKAP4-203ENST00000553039 RHOVQ96L33 236 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms