RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 CDRT15Q96T59 188 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 CDH22Q9UJ99 828 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 POMPQ9Y244 141 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 CRABP2P29373 138 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 SDC4P31431 198 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 GALK1P51570 392 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 HSD17B4P51659 736 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 ANKRD20A4Q4UJ75 823 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 C10orf107Q8IVU9 208 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 WDR83Q9BRX9 315 aaKnown RBP11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 TRPV6Q9H1D0 765 aa11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 RPAP3Q9H6T3 665 aaPredicted RBP11.96□□□□□ -0.49
PPFIA2-227ENST00000552948 TPP1O14773 563 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 GPD1P21695 349 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 EIF4BP23588 611 aaKnown RBP11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 GARSP41250 739 aaKnown RBP11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 GRIA1P42261 906 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 SERPINB9P50453 376 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 NRF1Q16656 503 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 PPM1JQ5JR12 505 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 B3GNT9Q6UX72 402 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 CCNYL1Q8N7R7 359 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 ZSCAN18Q8TBC5 510 aaPredicted RBP11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 FAM151AQ8WW52 585 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 JADE3Q92613 823 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 FAM149B1Q96BN6 582 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 CCT7Q99832 543 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 C20orf27Q9GZN8 174 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 FAM49BQ9NUQ9 324 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 CNTNAP2Q9UHC6 1331 aa11.96□□□□□ -0.5
PPFIA2-227ENST00000552948 RGS2P41220 211 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 HDAC4P56524 1084 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 FAM47CQ5HY64 1035 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 TRIM50Q86XT4 487 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 DGCR14Q96DF8 476 aaKnown RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 ZNF518BQ9C0D4 1074 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 GPAMQ9HCL2 828 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 NRBP2Q9NSY0 501 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 BCAP29Q9UHQ4 241 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 A0A088AWK7 358 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 SUPT3HO75486 399 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 TMCC1O94876 653 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 WASHC5Q12768 1159 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 TMCO4Q5TGY1 634 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 AAGABQ6PD74 315 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 B3GNT6Q6ZMB0 384 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 SNX32Q86XE0 403 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 PDSS2Q86YH6 399 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 MPP5Q8N3R9 675 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 ADAM32Q8TC27 787 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 LENG1Q96BZ8 264 aaPredicted RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 MARK4Q96L34 752 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 TEX264Q9Y6I9 313 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 ANKRD33BA6NCL7 494 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 SEC24DO94855 1032 aaPredicted RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 ASS1P00966 412 aaKnown RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 RPL5P46777 297 aaKnown RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 TAS1R3Q7RTX0 852 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 MRPL4Q9BYD3 311 aaKnown RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 UNKQ9C0B0 810 aaKnown RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 SEMA6AQ9H2E6 1030 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 NRDE2Q9H7Z3 1164 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 RPF1Q9H9Y2 349 aaKnown RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 C20orf96Q9NUD7 363 aaPredicted RBP11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 ZNF358Q9NW07 568 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 NDUFA13Q9P0J0 144 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 SSX2IPQ9Y2D8 614 aa11.95□□□□□ -0.5
PPFIA2-227ENST00000552948 SMIM31A0A1B0GVY4 71 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 GLRA3O75311 464 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 TRUB2O95900 331 aaKnown RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 SERPINE1P05121 402 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ITGA2BP08514 1039 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 MLH1P40692 756 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 GTF2A2P52657 109 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ADARP55265 1226 aaKnown RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 RAB6CQ53S08 254 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 NIPA1Q7RTP0 329 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CMC1Q7Z7K0 106 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 KIAA0319LQ8IZA0 1049 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CLEC4DQ8WXI8 215 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 DCUN1D1Q96GG9 259 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 RAB6CQ9H0N0 254 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 SUDS3Q9H7L9 328 aaPredicted RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ARHGAP28Q9P2N2 729 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 FETUBQ9UGM5 382 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 AP4B1Q9Y6B7 739 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 PHLPP1O60346 1717 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ATP9BO43861 1147 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ERBB2P04626 1255 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 PRKCBP05771 671 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 SPATA31D3P0C874 917 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 CPA3P15088 417 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 FGFR3P22607 806 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 FDFT1P37268 417 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 PPIDQ08752 370 aaKnown RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 C6orf52Q5T4I8 152 aa11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 ACBD5Q5T8D3 534 aaPredicted RBP11.94□□□□□ -0.5
PPFIA2-227ENST00000552948 SPATA31D4Q6ZUB0 917 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms