RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 AMPD3Q01432 767 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 ORC1Q13415 861 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 NCOA4Q13772 614 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 CNNM4Q6P4Q7 775 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 GPRIN1Q7Z2K8 1008 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 C12orf56Q8IXR9 622 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 C1orf216Q8TAB5 229 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 RHBDD1Q8TEB9 315 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 SIPA1Q96FS4 1042 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 NUP58Q9BVL2 599 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 NMUR1Q9HB89 426 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.8■□□□□ 0.44
CACNB3-222ENST00000552465 EIF2B4Q9UI10 523 aaKnown RBP17.8■□□□□ 0.44
CACNB3-222ENST00000552465 DNMT3LQ9UJW3 386 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 NUDT5Q9UKK9 219 aa17.8■□□□□ 0.44
CACNB3-222ENST00000552465 A0A1W2PQH9 124 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 HHLA1C9JL84 531 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 FLRT2O43155 660 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 SYNCRIPO60506 623 aaKnown RBP17.79■□□□□ 0.44
CACNB3-222ENST00000552465 EXOC3O60645 756 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 VNN1O95497 513 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 PENKP01210 267 aaPredicted RBP17.79■□□□□ 0.44
CACNB3-222ENST00000552465 IGLV3-19P01714 112 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 NDST1P52848 882 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 MFAP3P55082 362 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 CLDN10P78369 228 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 GEN1Q17RS7 908 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 MARCH9Q86YJ5 346 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 C12orf29Q8N999 325 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 PRCCQ92733 491 aaPredicted RBP17.79■□□□□ 0.44
CACNB3-222ENST00000552465 CUEDC2Q9H467 287 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 FAM49BQ9NUQ9 324 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 CGNQ9P2M7 1197 aaKnown RBP17.79■□□□□ 0.44
CACNB3-222ENST00000552465 HMGXB4Q9UGU5 601 aa17.79■□□□□ 0.44
CACNB3-222ENST00000552465 ITPR1Q14643 2758 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 A0A1B0GVT2 93 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 TRABD2BA6NFA1 517 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 LRRIQ3A6PVS8 624 aaPredicted RBP17.78■□□□□ 0.44
CACNB3-222ENST00000552465 STC2O76061 302 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 KLKB1P03952 638 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 FAM200BP0CF97 657 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 ADORA2BP29275 332 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 EHHADHQ08426 723 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 CYP4F3Q08477 520 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 CUL4AQ13619 759 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 SUZ12Q15022 739 aaKnown RBP17.78■□□□□ 0.44
CACNB3-222ENST00000552465 SGSM1Q2NKQ1 1148 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 C10orf120Q5SQS8 335 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 FYB2Q5VWT5 728 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 UNC93AQ86WB7 457 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 PARD3BQ8TEW8 1205 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 UCMAQ8WVF2 138 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 JAKMIP2Q96AA8 810 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 C7orf25Q9BPX7 421 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 ZNF510Q9Y2H8 683 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 NBEAQ8NFP9 2946 aa17.78■□□□□ 0.44
CACNB3-222ENST00000552465 EIF4E1BA6NMX2 242 aaKnown RBP17.77■□□□□ 0.44
CACNB3-222ENST00000552465 GOLGA8CPA6NN73 597 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 P4HA1P13674 534 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 SYT1P21579 422 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 CSNK1EP49674 416 aaKnown RBP17.77■□□□□ 0.44
CACNB3-222ENST00000552465 COPAP53621 1224 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 CAMK2BQ13554 666 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 CLEC20AQ6ZU45 233 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 UNC13DQ70J99 1090 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 GALNT15Q8N3T1 639 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 ZNF276Q8N554 614 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 DHX58Q96C10 678 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 PIWIL1Q96J94 861 aaKnown RBP17.77■□□□□ 0.44
CACNB3-222ENST00000552465 HNRNPABQ99729 332 aaKnown RBP17.77■□□□□ 0.44
CACNB3-222ENST00000552465 PCED1AQ9H1Q7 454 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 ELOVL2Q9NXB9 296 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 TFIP11Q9UBB9 837 aaKnown RBP17.77■□□□□ 0.44
CACNB3-222ENST00000552465 BTBD3Q9Y2F9 522 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 PCDHA5Q9Y5H7 936 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 FREM2Q5SZK8 3169 aa17.77■□□□□ 0.44
CACNB3-222ENST00000552465 RPN1P04843 607 aaKnown RBP17.76■□□□□ 0.43
CACNB3-222ENST00000552465 ACADMP11310 421 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 CHKAP35790 457 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 NASPP49321 788 aaPredicted RBP17.76■□□□□ 0.43
CACNB3-222ENST00000552465 ZNF234Q14588 700 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 E2F5Q15329 346 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 KNOP1Q1ED39 458 aaKnown RBP17.76■□□□□ 0.43
CACNB3-222ENST00000552465 KIF19Q2TAC6 998 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 SCD5Q86SK9 330 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 TADA2BQ86TJ2 420 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 SCUBE3Q8IX30 993 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 RBBP8NLQ8NC74 664 aaPredicted RBP17.76■□□□□ 0.43
CACNB3-222ENST00000552465 NAGPAQ9UK23 515 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.76■□□□□ 0.43
CACNB3-222ENST00000552465 SLCO1B1Q9Y6L6 691 aa17.76■□□□□ 0.43
CACNB3-222ENST00000552465 A0A087WV48 116 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 TNFSF14O43557 240 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 PRKCHP24723 683 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 PSEN1P49768 467 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 AFF3P51826 1226 aaKnown RBP17.75■□□□□ 0.43
CACNB3-222ENST00000552465 KIF11P52732 1056 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 COG7P83436 770 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 ANKS1BQ7Z6G8 1248 aa17.75■□□□□ 0.43
CACNB3-222ENST00000552465 FAM124AQ86V42 546 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms