RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 CCR3P51677 355 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 SYCP1Q15431 976 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 BEND5Q7L4P6 421 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 ERGIC2Q96RQ1 377 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 CPXM1Q96SM3 734 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 DCLK3Q9C098 648 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 FAM207AQ9NSI2 230 aaPredicted RBP20.28■□□□□ 0.84
GPN3-210ENST00000552180 MARK1Q9P0L2 795 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 AGO1Q9UL18 857 aaKnown RBP20.28■□□□□ 0.84
GPN3-210ENST00000552180 ZNF510Q9Y2H8 683 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 HBS1LQ9Y450 684 aaKnown RBP20.28■□□□□ 0.84
GPN3-210ENST00000552180 ATG2BQ96BY7 2078 aa20.28■□□□□ 0.84
GPN3-210ENST00000552180 ANTXRLA6NF34 631 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 SMTNL1A8MU46 457 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 RNF40O75150 1001 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 CHRM1P11229 460 aaPredicted RBP20.27■□□□□ 0.84
GPN3-210ENST00000552180 CORO1AP31146 461 aaKnown RBP20.27■□□□□ 0.84
GPN3-210ENST00000552180 KRT9P35527 623 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 JAM2P57087 298 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 PASD1Q8IV76 773 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 SFTPA1Q8IWL2 248 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 PLD4Q96BZ4 506 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 PNKPQ96T60 521 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 FANCMQ8IYD8 2048 aa20.27■□□□□ 0.84
GPN3-210ENST00000552180 K7ESF4 209 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 SART1O43290 800 aaKnown RBP20.26■□□□□ 0.83
GPN3-210ENST00000552180 HOXC13P31276 330 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 CDH5P33151 784 aaPredicted RBP20.26■□□□□ 0.83
GPN3-210ENST00000552180 POLR2FP61218 127 aaKnown RBP20.26■□□□□ 0.83
GPN3-210ENST00000552180 UBXN1Q04323 297 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 DENND1CQ8IV53 801 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 FAM217AQ8IXS0 508 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 NAT16Q8N8M0 369 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 ZBTB44Q8NCP5 570 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 PPP1R13BQ96KQ4 1090 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 WDR35Q9P2L0 1181 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 DAAM1Q9Y4D1 1078 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 R4GN57 208 aa20.26■□□□□ 0.83
GPN3-210ENST00000552180 MSI1O43347 362 aaKnown RBP20.25■□□□□ 0.83
GPN3-210ENST00000552180 TULP3O75386 442 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 KAT7O95251 611 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 IGLV3-27P01718 113 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 HOXD11P31277 338 aaPredicted RBP20.25■□□□□ 0.83
GPN3-210ENST00000552180 ANO4Q32M45 955 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 TPGS1Q6ZTW0 290 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 NOP9Q86U38 636 aaKnown RBP20.25■□□□□ 0.83
GPN3-210ENST00000552180 C1orf131Q8NDD1 294 aaKnown RBP20.25■□□□□ 0.83
GPN3-210ENST00000552180 PIWIL1Q96J94 861 aaKnown RBP20.25■□□□□ 0.83
GPN3-210ENST00000552180 BBS2Q9BXC9 721 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 FAM126AQ9BYI3 521 aaPredicted RBP20.25■□□□□ 0.83
GPN3-210ENST00000552180 NLRC4Q9NPP4 1024 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 RTN4Q9NQC3 1192 aaKnown RBP20.25■□□□□ 0.83
GPN3-210ENST00000552180 STOML2Q9UJZ1 356 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 FBXO10Q9UK96 956 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 NAALADL1Q9UQQ1 740 aa20.25■□□□□ 0.83
GPN3-210ENST00000552180 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.24■□□□□ 0.83
GPN3-210ENST00000552180 GFRA2O00451 464 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 TRIM24O15164 1050 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 TEX33O43247 280 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 CACNG3O60359 315 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 PENKP01210 267 aaPredicted RBP20.24■□□□□ 0.83
GPN3-210ENST00000552180 NCAM1P13591 858 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 TYRP14679 529 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 CHKAP35790 457 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 GRIA2P42262 883 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 YWHAZP63104 245 aaKnown RBP20.24■□□□□ 0.83
GPN3-210ENST00000552180 TAF5Q15542 800 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 PTPN20Q4JDL3 420 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 SYPL2Q5VXT5 272 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 CPXM2Q8N436 756 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 EPS8L1Q8TE68 723 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 DQX1Q8TE96 717 aaKnown RBP20.24■□□□□ 0.83
GPN3-210ENST00000552180 USP33Q8TEY7 942 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 GOLGA1Q92805 767 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 FAM149B1Q96BN6 582 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 ARHGEF4Q9NR80 690 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 POLR3BQ9NW08 1133 aaPredicted RBP20.24■□□□□ 0.83
GPN3-210ENST00000552180 ZSCAN32Q9NX65 697 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 DEC1Q9P2X7 70 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 NOCTQ9UK39 431 aaKnown RBP20.24■□□□□ 0.83
GPN3-210ENST00000552180 KIAA1549LQ6ZVL6 1849 aa20.24■□□□□ 0.83
GPN3-210ENST00000552180 NEDD8-MDP1E9PL57 170 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 LILRB5O75023 590 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 ATG13O75143 517 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 GFPT2O94808 682 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 ERBB2P04626 1255 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 APODP05090 189 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 CISD3P0C7P0 127 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 HOXA6P31267 233 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 SOX5P35711 763 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 TNFRSF4P43489 277 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 HARS2P49590 506 aaKnown RBP20.23■□□□□ 0.83
GPN3-210ENST00000552180 MRE11P49959 708 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 RING1Q06587 406 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 DMWDQ09019 674 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 SKOR2Q2VWA4 1001 aaPredicted RBP20.23■□□□□ 0.83
GPN3-210ENST00000552180 FYB2Q5VWT5 728 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 ALYREFQ86V81 257 aaKnown RBP20.23■□□□□ 0.83
GPN3-210ENST00000552180 NEK11Q8NG66 645 aa20.23■□□□□ 0.83
GPN3-210ENST00000552180 RPLP0P6Q8NHW5 317 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms