RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CYP1A1P04798 512 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-225ENST00000551845 IRF1P10914 325 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 TNFAIP3P21580 790 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 PBX1P40424 430 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 SLC6A3Q01959 620 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 EML3Q32P44 896 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 TOGARAM2Q6ZUX3 1019 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 BHLHA9Q7RTU4 235 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 SLC20A1Q8WUM9 679 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 CPA5Q8WXQ8 436 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 BAP1Q92560 729 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
PTCH1-225ENST00000551845 OSBPL6Q9BZF3 934 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 TBC1D17Q9HA65 648 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 POPDC2Q9HBU9 364 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 HPS4Q9NQG7 708 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 SEPT11Q9NVA2 429 aaKnown RBP11.1□□□□□ -0.63
PTCH1-225ENST00000551845 ASNSD1Q9NWL6 643 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 SFMBT1Q9UHJ3 866 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 NOCTQ9UK39 431 aaKnown RBP11.1□□□□□ -0.63
PTCH1-225ENST00000551845 NAALADL1Q9UQQ1 740 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 LUC7L2Q9Y383 392 aaKnown RBP11.1□□□□□ -0.63
PTCH1-225ENST00000551845 A0A1W2PQJ5 194 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 SPECC1L-ADORA2AF8WAN1 911 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 ERBB2P04626 1255 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 HMBSP08397 361 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 ARSAP15289 507 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 CHRNB2P17787 502 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 CD72P21854 359 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 CHKAP35790 457 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 GABRB2P47870 512 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 HARS2P49590 506 aaKnown RBP11.09□□□□□ -0.63
PTCH1-225ENST00000551845 FMO1Q01740 532 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 UBXN2BQ14CS0 331 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 DHCR24Q15392 516 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 ASIC2Q16515 512 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 PTPN20Q4JDL3 420 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 NAA35Q5VZE5 725 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 PLD4Q96BZ4 506 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 DDX23Q9BUQ8 820 aaKnown RBP11.09□□□□□ -0.63
PTCH1-225ENST00000551845 TRIM5Q9C035 493 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 TJP2Q9UDY2 1190 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 CAPN11Q9UMQ6 739 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 HBS1LQ9Y450 684 aaKnown RBP11.09□□□□□ -0.63
PTCH1-225ENST00000551845 BZW2Q9Y6E2 419 aaKnown RBP11.09□□□□□ -0.63
PTCH1-225ENST00000551845 DCHS1Q96JQ0 3298 aa11.09□□□□□ -0.63
PTCH1-225ENST00000551845 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 SCAMP3O14828 347 aaKnown RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 GREM1O60565 184 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 HSF2BPO75031 334 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 STC2O76061 302 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 FYNP06241 537 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 TPM1P09493 284 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 UNGP13051 313 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 GBP1P32455 592 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 CTHP32929 405 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 GJA4P35212 333 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 NSFP46459 744 aaKnown RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 SOX9P48436 509 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 TBX4P57082 545 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 RNASE9P60153 205 aaKnown RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 NOMO3P69849 1222 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 ZBED6P86452 979 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 CDK17Q00537 523 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 GAD2Q05329 585 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 KLHL30Q0D2K2 578 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 TAF5Q15542 800 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 TRIP4Q15650 581 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 RSPO4Q2I0M5 234 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 DCAF6Q58WW2 860 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 SYPL2Q5VXT5 272 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 SPECC1LQ69YQ0 1117 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 PPP1R2P3Q6NXS1 205 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 MSANTD2Q6P1R3 559 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 ZC3H14Q6PJT7 736 aaKnown RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 FAM183BPQ6ZVS7 135 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 DENND1CQ8IV53 801 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 UNC45BQ8IWX7 931 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 BBS7Q8IWZ6 715 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 DEFB106AQ8N104 65 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 DCLK2Q8N568 766 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 RUBCNQ92622 972 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 SYN2Q92777 582 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-225ENST00000551845 WBP2Q969T9 261 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 SERPINB11Q96P15 392 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 PCDHB18PQ96TA0 734 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 RBSNQ9H1K0 784 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 HAUS4Q9H6D7 363 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 LTB4R2Q9NPC1 389 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 WDR35Q9P2L0 1181 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 DMDP11532 3685 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 ITIH6Q6UXX5 1313 aa11.08□□□□□ -0.64
PTCH1-225ENST00000551845 DENND4AQ7Z401 1863 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 TRDMT1O14717 391 aaKnown RBP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 GRAP2O75791 330 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 ADH1CP00326 375 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 KLKB1P03952 638 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 CALB1P05937 261 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms