RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 C12orf56Q8IXR9 622 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 RPUSD2Q8IZ73 545 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 SYCP3Q8IZU3 236 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TXNDC5Q8NBS9 432 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 RSPH1Q8WYR4 309 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 SEPT8Q92599 483 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 KISS1RQ969F8 398 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TRIM43Q96BQ3 446 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TMEM209Q96SK2 561 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 KIFC3Q9BVG8 833 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 IFIH1Q9BYX4 1025 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 NAT10Q9H0A0 1025 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 MINDY3Q9H8M7 445 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 POLD4Q9HCU8 107 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 ERVK-5Q9HDB9 667 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 SLC39A2Q9NP94 309 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 AGPAT5Q9NUQ2 364 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 ANO10Q9NW15 660 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TBC1D7Q9P0N9 293 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 PADI3Q9ULW8 664 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TRAF3IP3Q9Y228 551 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 GINS2Q9Y248 185 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TNFSF13BQ9Y275 285 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 NOC2LQ9Y3T9 749 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 STYXL1Q9Y6J8 313 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 ZMYM2Q9UBW7 1377 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 A0A0B4J269 797 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 ABHD14A-ACY1A0A1B0GW23 586 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 NBNO60934 754 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 BAIAP3O94812 1187 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 MCF2P10911 925 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 GHRP10912 638 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 FAHP16930 419 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 ZNF28P17035 718 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 ARF4P18085 180 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 PROZP22891 400 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 HOXA11P31270 313 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 CD52P31358 61 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 CYP2C18P33260 490 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 CNR2P34972 360 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 HOXD13P35453 343 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 PRCPP42785 496 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 LIG4P49917 911 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 MLLT6P55198 1093 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 GABREP78334 506 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 GUCY1A3Q02108 690 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 FPGSQ05932 587 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 MCL1Q07820 350 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 GPNMBQ14956 572 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 NFIL3Q16649 462 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 EDRF1Q3B7T1 1238 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 DPCR1Q3MIW9 517 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 DCAF4L1Q3SXM0 396 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 PAN2Q504Q3 1202 aaKnown RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 ZCWPW2Q504Y3 356 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 ATF7IP2Q5U623 682 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 CENPPQ6IPU0 288 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 NOTUMQ6P988 496 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 SLC27A1Q6PCB7 646 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 FAM228AQ86W67 206 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 PCDH19Q8TAB3 1148 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 SH3RF2Q8TEC5 729 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 ERCC4Q92889 916 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 HPS3Q969F9 1004 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 ACO2Q99798 780 aaKnown RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 LBHD1Q9BQE6 289 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 BPIFA3Q9BQP9 254 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 FGFBP2Q9BYJ0 223 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 KCTD10Q9H3F6 313 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 AGO3Q9H9G7 860 aaKnown RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 KIAA1586Q9HCI6 787 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 PTPRHQ9HD43 1115 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 IL23AQ9NPF7 189 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 AGPAT3Q9NRZ7 376 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 C1orf112Q9NSG2 853 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 TYW1Q9NV66 732 aaKnown RBP6.23□□□□□ -1.41
SCAF11-213ENST00000550629 RWDD2AQ9UIY3 292 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 CROTQ9UKG9 612 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 ST3GAL5Q9UNP4 418 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 GDAQ9Y2T3 454 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 NUB1Q9Y5A7 615 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 TANC1Q9C0D5 1861 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 UMODL1Q5DID0 1318 aa6.23□□□□□ -1.41
SCAF11-213ENST00000550629 SIP14410 1827 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 KAT6AQ92794 2004 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 A0A0U1RQF3 1178 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 SYCE3A1L190 88 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 WNT9AO14904 365 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 CLDN3O15551 220 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 B4GALT5O43286 388 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 TGFB1I1O43294 461 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 CALUO43852 315 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 ZNF623O75123 536 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 PRPF6O94906 941 aaKnown RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 FGFR1OPO95684 399 aaKnown RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 LDHAP00338 332 aaKnown RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 ACTN1P12814 892 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 CSF2RAP15509 400 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 ZSCAN20P17040 1043 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms