RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 RTP2Q5QGT7 225 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 ZNF697Q5TEC3 545 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 KAZNQ674X7 775 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 TTC27Q6P3X3 843 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 C4orf22Q6V702 233 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 PDZD4Q76G19 769 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-217ENST00000550483 BHLHA9Q7RTU4 235 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 GPRIN1Q7Z2K8 1008 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 TADA2BQ86TJ2 420 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 SCN4BQ8IWT1 228 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 COLGALT1Q8NBJ5 622 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 SLC35B2Q8TB61 432 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 PHOSPHO2Q8TCD6 241 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 C1orf54Q8WWF1 131 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 CASKIN2Q8WXE0 1202 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 IFT81Q8WYA0 676 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 OVCA2Q8WZ82 227 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 P3H4Q92791 437 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 SERPINB11Q96P15 392 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 FERMT1Q9BQL6 677 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 FAM204AQ9H8W3 233 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 TMEM30AQ9NV96 361 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 KLHL11Q9NVR0 708 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 CLIC5Q9NZA1 410 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 AFF4Q9UHB7 1163 aaKnown RBP13.07□□□□□ -0.32
CACNB3-217ENST00000550483 FZD10Q9ULW2 581 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 RWDD3Q9Y3V2 267 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 PCDHB12Q9Y5F1 795 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 COL4A6Q14031 1691 aa13.07□□□□□ -0.32
CACNB3-217ENST00000550483 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 MAP2K7O14733 419 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 URODP06132 367 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 FYNP06241 537 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 KRT10P13645 584 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 L1CAMP32004 1257 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 CXCR3P49682 368 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 RBM10P98175 930 aaKnown RBP13.06□□□□□ -0.32
CACNB3-217ENST00000550483 XRCC4Q13426 336 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 CASP8Q14790 479 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 ANKRD20A8PQ5CZ79 823 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 SH3PXD2AQ5TCZ1 1133 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 MSANTD2Q6P1R3 559 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 DENND5BQ6ZUT9 1274 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 GSTA5Q7RTV2 222 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 PCGF5Q86SE9 256 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 PDZD8Q8NEN9 1154 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 SLC7A14Q8TBB6 771 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 RIN2Q8WYP3 895 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-217ENST00000550483 SNF8Q96H20 258 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 FUT8Q9BYC5 575 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 SMOC2Q9H3U7 446 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 DHX35Q9H5Z1 703 aaKnown RBP13.06□□□□□ -0.32
CACNB3-217ENST00000550483 DDIT4Q9NX09 232 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 NFU1Q9UMS0 254 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 ZNF148Q9UQR1 794 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
CACNB3-217ENST00000550483 DAPK3O43293 454 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 ZMYND10O75800 440 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 GJB5O95377 273 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 IGLV3-25P01717 112 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 OR4Q2P0C623 313 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 ATF2P15336 505 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 ITGB8P26012 769 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 YWHAQP27348 245 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 ADRA1BP35368 520 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 TNNT3P45378 269 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 KPNA1P52294 538 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 DEFB103AP81534 67 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 OTUD4Q01804 1114 aaKnown RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 SLMAPQ14BN4 828 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 NOMO1Q15155 1222 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 SHHQ15465 462 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 OASLQ15646 514 aaKnown RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 MGAT5BQ3V5L5 792 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 OTUD1Q5VV17 481 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 ALS2CLQ60I27 953 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 FIBCD1Q8N539 461 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 ALLCQ8N6M5 410 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 ACTL9Q8TC94 416 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 FMO2Q99518 471 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 LBHD1Q9BQE6 289 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 HERPUD2Q9BSE4 406 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 TTLL2Q9BWV7 592 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 RHOBTB2Q9BYZ6 727 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 TTYH1Q9H313 450 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 WDCPQ9H6R7 721 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 PCDH9Q9HC56 1237 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 ZNF446Q9NWS9 450 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 DONSONQ9NYP3 566 aa13.05□□□□□ -0.32
CACNB3-217ENST00000550483 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNB3-217ENST00000550483 FNIP2Q9P278 1114 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms