RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GOLGA5Q8TBA6 731 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 SLC2A14Q8TDB8 520 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 TAF4BQ92750 862 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 INTS4Q96HW7 963 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 MAGEF1Q9HAY2 307 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 PNPLA8Q9NP80 782 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 OSER1Q9NX31 292 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 WSB2Q9NYS7 404 aaPredicted RBP10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 USP36Q9P275 1121 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 TFIP11Q9UBB9 837 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 LSM7Q9UK45 103 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 MTMR6Q9Y217 621 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 APOBEC2Q9Y235 224 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 STON1Q9Y6Q2 735 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 NBEAQ8NFP9 2946 aa10.39□□□□□ -0.75
TRAFD1-207ENST00000550051 LRRIQ3A6PVS8 624 aaPredicted RBP10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 METTL12A8MUP2 240 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 IKBKBO14920 756 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 SPTLC2O15270 562 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 CUTAO60888 179 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 PENKP01210 267 aaPredicted RBP10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 IGLV3-19P01714 112 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 FTH1P19P0C7X4 201 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 CCDC130P13994 396 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 MAOBP27338 520 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 OXTRP30559 389 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 NDST1P52848 882 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 BIRC3Q13489 604 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 STK38Q15208 465 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 ZACNQ401N2 412 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 FUT11Q495W5 492 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 SHC4Q6S5L8 630 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 SLCO6A1Q86UG4 719 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 C12orf29Q8N999 325 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 DHX58Q96C10 678 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 HNRNPABQ99729 332 aaKnown RBP10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 SLC6A17Q9H1V8 727 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 PRDM16Q9HAZ2 1276 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 CD93Q9NPY3 652 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 KRT82Q9NSB4 513 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 CACNA2D2Q9NY47 1150 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 DNMT3LQ9UJW3 386 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 PCOLCE2Q9UKZ9 415 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 ZNF510Q9Y2H8 683 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 PCDHA5Q9Y5H7 936 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 RAD54BQ9Y620 910 aa10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 FASNP49327 2511 aaKnown RBP10.38□□□□□ -0.75
TRAFD1-207ENST00000550051 ANKRD11Q6UB99 2663 aaPredicted RBP10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 TIMM44O43615 452 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 STC2O76061 302 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 DKK1O94907 266 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 ASS1P00966 412 aaKnown RBP10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 KLKB1P03952 638 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 FAM200BP0CF97 657 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 RARGP13631 454 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 CHKAP35790 457 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 COG7P83436 770 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 GRIK2Q13002 908 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 IL27RAQ6UWB1 636 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 TMPRSS6Q8IU80 811 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 PNPLA1Q8N8W4 532 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 C1orf216Q8TAB5 229 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 CYFIP2Q96F07 1278 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 P2RY11Q96G91 374 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 TOE1Q96GM8 510 aaKnown RBP10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 NUP58Q9BVL2 599 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 MKRN2Q9H000 416 aaKnown RBP10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 PCED1AQ9H1Q7 454 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 CCDC86Q9H6F5 360 aaKnown RBP10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 NMUR1Q9HB89 426 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 SLC39A2Q9NP94 309 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 CLIC5Q9NZA1 410 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 THAP10Q9P2Z0 257 aaPredicted RBP10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 DKK4Q9UBT3 224 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 PCDHGB2Q9Y5G2 931 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 USP3Q9Y6I4 520 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 FREM2Q5SZK8 3169 aa10.37□□□□□ -0.75
TRAFD1-207ENST00000550051 A0A1W2PQH9 124 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 KCNJ18B7U540 433 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 POLR2DO15514 142 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 STX6O43752 255 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 YEATS4O95619 227 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 NCAM1P13591 858 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 TRIM21P19474 475 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 TPMTP51580 245 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 KIF11P52732 1056 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 MFAP3P55082 362 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 DLG4P78352 724 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 INCA1Q0VD86 236 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 STARD3Q14849 445 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 GEN1Q17RS7 908 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 SOWAHCQ53LP3 525 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 C10orf120Q5SQS8 335 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 FYB2Q5VWT5 728 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 KIAA1324Q6UXG2 1013 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 CLEC20AQ6ZU45 233 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 SV2AQ7L0J3 742 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 TMPRSS7Q7RTY8 843 aa10.36□□□□□ -0.75
TRAFD1-207ENST00000550051 GPRIN1Q7Z2K8 1008 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms