RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 SCAPQ12770 1279 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 KCNC3Q14003 757 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 PPP2R5DQ14738 602 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 ZFYVE27Q5T4F4 411 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 ERMARDQ5T6L9 678 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 ACBD5Q5T8D3 534 aaPredicted RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 PRPF38BQ5VTL8 546 aaKnown RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 VSIG1Q86XK7 387 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 MAP7D3Q8IWC1 876 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 ALG3Q92685 438 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 NAP1L3Q99457 506 aaPredicted RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 LRRC3Q9BY71 257 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 NACA2Q9H009 215 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 ZNF334Q9HCZ1 680 aaPredicted RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 PIGVQ9NUD9 493 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 MARCH2Q9P0N8 246 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 PCSK1NQ9UHG2 260 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 TTC7AQ9ULT0 858 aaPredicted RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 TLR6Q9Y2C9 796 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 HBS1LQ9Y450 684 aaKnown RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 RANBP2P49792 3224 aaKnown RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 CLUHO75153 1309 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 KRT1P04264 644 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 POU3F3P20264 500 aaPredicted RBP18.09■□□□□ 0.49
LETMD1-220ENST00000549686 IL1R2P27930 398 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 GABRR2P28476 465 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 CCR1P32246 355 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 MARCKSL1P49006 195 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 PITX1P78337 314 aaPredicted RBP18.09■□□□□ 0.49
LETMD1-220ENST00000549686 RING1Q06587 406 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 CKAP4Q07065 602 aaKnown RBP18.09■□□□□ 0.49
LETMD1-220ENST00000549686 PDK2Q15119 407 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 TRIP4Q15650 581 aaPredicted RBP18.09■□□□□ 0.49
LETMD1-220ENST00000549686 DAB2IPQ5VWQ8 1189 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 PDZD4Q76G19 769 aaPredicted RBP18.09■□□□□ 0.49
LETMD1-220ENST00000549686 EFHBQ8N7U6 833 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 CORO1BQ9BR76 489 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 ADAM33Q9BZ11 813 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 WDCPQ9H6R7 721 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 ZWILCHQ9H900 591 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 L2HGDHQ9H9P8 463 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 WDR6Q9NNW5 1121 aaKnown RBP18.09■□□□□ 0.49
LETMD1-220ENST00000549686 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.09■□□□□ 0.49
LETMD1-220ENST00000549686 MRFAP1Q9Y605 127 aa18.09■□□□□ 0.49
LETMD1-220ENST00000549686 ZNF487B1APH4 448 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 ZNF197O14709 1029 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 TADA3O75528 432 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 RFPL2O75678 378 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 OAS1P00973 400 aaKnown RBP18.08■□□□□ 0.48
LETMD1-220ENST00000549686 RARAP10276 462 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 TCF4P15884 667 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 PTPN7P35236 360 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 GJC1P36383 396 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 PAFAH1B1P43034 410 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 COG7P83436 770 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 EFEMP1Q12805 493 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 EFHC2Q5JST6 749 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 CCDC181Q5TID7 509 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 CYP4V2Q6ZWL3 525 aaPredicted RBP18.08■□□□□ 0.48
LETMD1-220ENST00000549686 TMEM150AQ86TG1 271 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 FAM131BQ86XD5 332 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 RASGEF1CQ8N431 466 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 ADAM32Q8TC27 787 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 ACTRT1Q8TDG2 376 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 RNF34Q969K3 372 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 PEBP4Q96S96 227 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 PSMB7Q99436 277 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 CALCOCO1Q9P1Z2 691 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 SLC12A6Q9UHW9 1150 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 RASAL2Q9UJF2 1139 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 EFR3BQ9Y2G0 817 aa18.08■□□□□ 0.48
LETMD1-220ENST00000549686 SYNJ2BP-COX16A0A087WUM0 186 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 CCDC195A0A1B0GUA6 201 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 CEP104O60308 925 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 APOEP02649 317 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 MYL4P12829 197 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 HOXB8P17481 243 aaPredicted RBP18.07■□□□□ 0.48
LETMD1-220ENST00000549686 CXCR5P32302 372 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 ADRA1BP35368 520 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 TBX4P57082 545 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 PPP2R5EQ16537 467 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 DPYSL2Q16555 572 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 ARHGAP15Q53QZ3 475 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 TCEAL5Q5H9L2 206 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 DCAF12L1Q5VU92 463 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 NUGGCQ68CJ6 796 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 KCTD6Q8NC69 237 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 MNS1Q8NEH6 495 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 FAM71BQ8TC56 605 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 COG1Q8WTW3 980 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 MAIP1Q8WWC4 291 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 HSPH1Q92598 858 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 SLC39A13Q96H72 371 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 HAPLN3Q96S86 360 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 SNRNP25Q9BV90 132 aaKnown RBP18.07■□□□□ 0.48
LETMD1-220ENST00000549686 ATXN3LQ9H3M9 355 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 CCSER2Q9H7U1 834 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 PRDM16Q9HAZ2 1276 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 PIDD1Q9HB75 910 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms