RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PCDHA11Q9Y5I1 949 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 ANK1P16157 1881 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 IGKV6-21A0A0C4DH24 114 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 C19orf81C9J6K1 198 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 DPYSL4O14531 572 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 GCATO75600 419 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 UBTFL6P0CB48 400 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 PTPRAP18433 802 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 ATICP31939 592 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 ORC1Q13415 861 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 TUBB3Q13509 450 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 UBAP2LQ14157 1087 aaKnown RBP10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 C15orf59Q2T9L4 293 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 EFHC1Q5JVL4 640 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 RABGAP1LQ5R372 815 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 FAXCQ5TGI0 409 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 MROH9Q5TGP6 573 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 CATSPERGQ6ZRH7 1159 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 ZNF534Q76KX8 674 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 CCNJLQ8IV13 435 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 CDKL3Q8IVW4 592 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 C1orf127Q8N9H9 656 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 FAM172AQ8WUF8 416 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 SEPT1Q8WYJ6 367 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 AZIN2Q96A70 460 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 TTC1Q99614 292 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 EBF4Q9BQW3 602 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 ZNF670Q9BS34 389 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 FZD8Q9H461 694 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 SMYD3Q9H7B4 428 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 RPF1Q9H9Y2 349 aaKnown RBP10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 PCDH18Q9HCL0 1135 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 MOCS1Q9NZB8 636 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 HMGXB4Q9UGU5 601 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 HEY1Q9Y5J3 304 aa10.22□□□□□ -0.77
SMARCD1-205ENST00000548573 KLHL33A6NCF5 533 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 CCNT2O60583 730 aaKnown RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 GLRA3O75311 464 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 RTN3O95197 1032 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 BAG2O95816 211 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 GSRP00390 522 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 PIM1P11309 404 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 MYL4P12829 197 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 P4HA1P13674 534 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 L1CAMP32004 1257 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 TCF7P36402 384 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 HMGCS2P54868 508 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 POLE2P56282 527 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 ZNF280AP59817 542 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 XIAPP98170 497 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 FSTL1Q12841 308 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 FASTKD1Q53R41 847 aaKnown RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 DCAF15Q66K64 600 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 MBLAC2Q68D91 279 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 OR6B2Q6IFH4 312 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 TRMT10BQ6PF06 316 aaKnown RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 FAM183BPQ6ZVS7 135 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 ACAD11Q709F0 780 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 MARK2Q7KZI7 788 aaKnown RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 HOMEZQ8IX15 550 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 CHST13Q8NET6 341 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.21□□□□□ -0.772e-8■■■■■ 51
SMARCD1-205ENST00000548573 PCDH19Q8TAB3 1148 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 DEPDC1BQ8WUY9 529 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 JADE3Q92613 823 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 VCX3BQ9H321 246 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 FAM124BQ9H5Z6 455 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 PICK1Q9NRD5 415 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 ETAA1Q9NY74 926 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 ZNF112Q9UJU3 913 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 ITGA11Q9UKX5 1188 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 KIAA1257Q9ULG3 409 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 APOBEC2Q9Y235 224 aaKnown RBP10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 MAD1L1Q9Y6D9 718 aa10.21□□□□□ -0.77
SMARCD1-205ENST00000548573 MDM4O15151 490 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 ALDH1A2O94788 518 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 C6orf222P0C671 652 aaPredicted RBP10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 CXCL8P10145 99 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 CDK7P50613 346 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 RPL26P61254 145 aaKnown RBP10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 OSTNP61366 133 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 BTKQ06187 659 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 DYNC1I2Q13409 638 aaKnown RBP10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 CDO1Q16878 200 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 CCDC14Q49A88 953 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 RAB6CQ53S08 254 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 DHDDSQ86SQ9 333 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 NCAPG2Q86XI2 1143 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 PDSS2Q86YH6 399 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 PPP1R14CQ8TAE6 165 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 UBA3Q8TBC4 463 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 NCSTNQ92542 709 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 HEXIM2Q96MH2 286 aaKnown RBP10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 TUBGCP5Q96RT8 1024 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 RAB6CQ9H0N0 254 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 GBA2Q9HCG7 927 aaPredicted RBP10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 HOXC10Q9NYD6 342 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 TNFSF13BQ9Y275 285 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 TBC1D30Q9Y2I9 924 aa10.21□□□□□ -0.78
SMARCD1-205ENST00000548573 METTL18O95568 372 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms