RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ACOX2Q99424 681 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 TRPC7Q9HCX4 862 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 ARHGEF4Q9NR80 690 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 INTS13Q9NVM9 706 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 FTSJ1Q9UET6 329 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 LRBAP50851 2863 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 GOLGA6L4A6NEF3 574 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 PDXKO00764 312 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 HOXB2P14652 356 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 GRIA2P42262 883 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 DHCR24Q15392 516 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 SNRNP35Q16560 246 aaKnown RBP14.86□□□□□ -0.03
PTCH1-217ENST00000548420 BROXQ5VW32 411 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 DSTYKQ6XUX3 929 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 ZCWPW1Q9H0M4 648 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 GZF1Q9H116 711 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-217ENST00000548420 CHMP5Q9NZZ3 219 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 SIX4Q9UIU6 781 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 MAGED2Q9UNF1 606 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-217ENST00000548420 NFE2L3Q9Y4A8 694 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 POLQO75417 2590 aa14.86□□□□□ -0.03
PTCH1-217ENST00000548420 C2orf78A6NCI8 922 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 MEI4A8MW99 385 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 KPNA7A9QM74 516 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 SCAMP3O14828 347 aaKnown RBP14.85□□□□□ -0.03
PTCH1-217ENST00000548420 PCDHGA12O60330 932 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 USP17L7P0C7H9 530 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 NCAM1P13591 858 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 TCF3P15923 654 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 ITGB6P18564 788 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 PNPLA4P41247 253 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 TAF6P49848 677 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 TFAMQ00059 246 aaKnown RBP14.85□□□□□ -0.03
PTCH1-217ENST00000548420 IL9RQ01113 521 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 CYP24A1Q07973 514 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 PSMD6Q15008 389 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 NFIL3Q16649 462 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 KCNT1Q5JUK3 1230 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 DCAF12L1Q5VU92 463 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 RHBDF2Q6PJF5 856 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 LRRC52Q8N7C0 313 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 OR5B17Q8NGF7 314 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
PTCH1-217ENST00000548420 CCDC34Q96HJ3 373 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 GPR174Q9BXC1 333 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 STARD5Q9NSY2 213 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 WSB2Q9NYS7 404 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-217ENST00000548420 EIF2B4Q9UI10 523 aaKnown RBP14.85□□□□□ -0.03
PTCH1-217ENST00000548420 ITGA11Q9UKX5 1188 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 TRAF3IP3Q9Y228 551 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 PTPRJQ12913 1337 aa14.85□□□□□ -0.03
PTCH1-217ENST00000548420 H0Y8X5 98 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 CYB561D2O14569 222 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 ENC1O14682 589 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 RFPL3O75679 317 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 ITGB3P05106 788 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 CKMP06732 381 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 ODC1P11926 461 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 CD6P30203 668 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 EIF2DP41214 584 aaKnown RBP14.84□□□□□ -0.03
PTCH1-217ENST00000548420 ACADVLP49748 655 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 CYP2J2P51589 502 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 PCBP4P57723 403 aaKnown RBP14.84□□□□□ -0.03
PTCH1-217ENST00000548420 CLDN10P78369 228 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 DUOXA2Q1HG44 320 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 LINC00303Q3SY05 128 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 LIMS2Q7Z4I7 341 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 FILIP1Q7Z7B0 1213 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 WDR49Q8IV35 697 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 GUF1Q8N442 669 aaKnown RBP14.84□□□□□ -0.03
PTCH1-217ENST00000548420 CSGALNACT2Q8N6G5 542 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 RDH13Q8NBN7 331 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 CCDC47Q96A33 483 aaKnown RBP14.84□□□□□ -0.03
PTCH1-217ENST00000548420 TOE1Q96GM8 510 aaKnown RBP14.84□□□□□ -0.03
PTCH1-217ENST00000548420 FAM84AQ96KN4 292 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 MRGPRX1Q96LB2 322 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 GDAP2Q9NXN4 497 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 DSEQ9UL01 958 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 AGAP1Q9UPQ3 857 aa14.84□□□□□ -0.03
PTCH1-217ENST00000548420 NUMA1Q14980 2115 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 TRAV19A0A0A6YYK7 116 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 METTL12A8MUP2 240 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 KCNJ18B7U540 433 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 K7ENP7 123 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 TRIM24O15164 1050 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 KLK10O43240 276 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 KIF20AO95235 890 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 POLR2BP30876 1174 aaKnown RBP14.83□□□□□ -0.04
PTCH1-217ENST00000548420 MCCD1P59942 119 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-217ENST00000548420 RBP5P82980 135 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 PNOCQ13519 176 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 SV2CQ496J9 727 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 COBLL1Q53SF7 1204 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 INO80CQ6PI98 192 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-217ENST00000548420 LAYNQ6UX15 382 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 DHX40Q8IX18 779 aaKnown RBP14.83□□□□□ -0.04
PTCH1-217ENST00000548420 NOC3LQ8WTT2 800 aaKnown RBP14.83□□□□□ -0.04
PTCH1-217ENST00000548420 ZNF516Q92618 1163 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 ANKRD36BP1Q96IX9 119 aa14.83□□□□□ -0.04
PTCH1-217ENST00000548420 ZNF560Q96MR9 790 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms