RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 CORO1AP31146 461 aaKnown RBP13.06□□□□□ -0.32
GCN1-204ENST00000548132 PSEN1P49768 467 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 TKTL1P51854 596 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 YWHAGP61981 247 aaKnown RBP eCLIP13.06□□□□□ -0.32
GCN1-204ENST00000548132 BST2Q10589 180 aaKnown RBP13.06□□□□□ -0.32
GCN1-204ENST00000548132 EFEMP1Q12805 493 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 GRAMD4Q6IC98 578 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 KLHL10Q6JEL2 608 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 TTC39CQ8N584 583 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 NELFBQ8WX92 580 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 BHMTQ93088 406 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 DHTKD1Q96HY7 919 aaPredicted RBP13.06□□□□□ -0.32
GCN1-204ENST00000548132 HEXIM2Q96MH2 286 aaKnown RBP13.06□□□□□ -0.32
GCN1-204ENST00000548132 KREMEN1Q96MU8 473 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 GABRG3Q99928 467 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 UBXN6Q9BZV1 441 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 PLK2Q9NYY3 685 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 CALCOCO1Q9P1Z2 691 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 DEC1Q9P2X7 70 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.06□□□□□ -0.32
GCN1-204ENST00000548132 ZZEF1O43149 2961 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
GCN1-204ENST00000548132 PLXNA2O75051 1894 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 TMEM131Q92545 1883 aa13.06□□□□□ -0.32
GCN1-204ENST00000548132 YJEFN3A6XGL0 299 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 E7ENQ6 273 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 BIN1O00499 593 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 MSI1O43347 362 aaKnown RBP13.05□□□□□ -0.32
GCN1-204ENST00000548132 ZBED1O96006 694 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 ADRB1P08588 477 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 HOXB2P14652 356 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 NDUFV2P19404 249 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 WASP42768 502 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 PTGER3P43115 390 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 SGSHP51688 502 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 MFAP3P55082 362 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 MARSP56192 900 aaKnown RBP13.05□□□□□ -0.32
GCN1-204ENST00000548132 DAOAP59103 153 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 ELF2Q15723 593 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 GEN1Q17RS7 908 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 AASDHQ4L235 1098 aaPredicted RBP13.05□□□□□ -0.32
GCN1-204ENST00000548132 SGO2Q562F6 1265 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 EOGTQ5NDL2 527 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 PEAR1Q5VY43 1037 aaPredicted RBP13.05□□□□□ -0.32
GCN1-204ENST00000548132 RNF43Q68DV7 783 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 CCDC26Q8TAB7 109 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 CLEC4CQ8WTT0 213 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 ERLEC1Q96DZ1 483 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 CCDC34Q96HJ3 373 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 SLC6A17Q9H1V8 727 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 VPS45Q9NRW7 570 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 LSM7Q9UK45 103 aaKnown RBP13.05□□□□□ -0.32
GCN1-204ENST00000548132 AGO1Q9UL18 857 aaKnown RBP13.05□□□□□ -0.32
GCN1-204ENST00000548132 RAD54BQ9Y620 910 aa13.05□□□□□ -0.32
GCN1-204ENST00000548132 CHD6Q8TD26 2715 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 TBC1D3BA6NDS4 549 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 GOLGA6L4A6NEF3 574 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 IGLV3-27P01718 113 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 HMBSP08397 361 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 SETSIPP0DME0 302 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 CD19P15391 556 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 SDHBP21912 280 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 TBXAS1P24557 533 aaPredicted RBP13.04□□□□□ -0.32
GCN1-204ENST00000548132 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
GCN1-204ENST00000548132 HOXD9P28356 352 aaPredicted RBP13.04□□□□□ -0.32
GCN1-204ENST00000548132 DGKGP49619 791 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 STX17P56962 302 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 CREB5Q02930 508 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 ENPP2Q13822 863 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
GCN1-204ENST00000548132 PPM1JQ5JR12 505 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 STPG1Q5TH74 334 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 BTBD8Q5XKL5 378 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 TMEM215Q68D42 235 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 MSANTD2Q6P1R3 559 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 TMEM270Q6UE05 265 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 SCML4Q8N228 414 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 UBA3Q8TBC4 463 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 KCTD13Q8WZ19 329 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 PIWIL1Q96J94 861 aaKnown RBP13.04□□□□□ -0.32
GCN1-204ENST00000548132 EDEM2Q9BV94 578 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 CACNA2D2Q9NY47 1150 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 MARCH2Q9P0N8 246 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 SLC27A6Q9Y2P4 619 aa13.04□□□□□ -0.32
GCN1-204ENST00000548132 IGHV1OR15-9A0A0B4J2B8 117 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 PAEPP09466 180 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 VDRP11473 427 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 TRIM21P19474 475 aaKnown RBP13.03□□□□□ -0.32
GCN1-204ENST00000548132 NTSR1P30989 418 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 GBP1P32455 592 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 RGS7P49802 495 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 GCNT1Q02742 428 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 GOLGA8FQ08AF8 430 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 GOLGA8DPQ0D2H9 430 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 PAK1Q13153 545 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 CCDC40Q4G0X9 1142 aa13.03□□□□□ -0.32
GCN1-204ENST00000548132 USP39Q53GS9 565 aaKnown RBP13.03□□□□□ -0.32
GCN1-204ENST00000548132 PMF1Q6P1K2 205 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms