RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SLC8A3P57103 927 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 FKBP3Q00688 224 aaKnown RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 EFEMP1Q12805 493 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 STIM1Q13586 685 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 PREPLQ4J6C6 727 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 PPM1JQ5JR12 505 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 EOGTQ5NDL2 527 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 C10orf76Q5T2E6 689 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 IL31Q6EBC2 164 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 TCEAL6Q6IPX3 200 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 SCD5Q86SK9 330 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 TADA2BQ86TJ2 420 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 PIGZQ86VD9 579 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 TTC39CQ8N584 583 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 FRMD1Q8N878 549 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 ENGASEQ8NFI3 743 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 MDGA1Q8NFP4 955 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 HMGB4Q8WW32 186 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 NDRG1Q92597 394 aaKnown RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 TCEAL3Q969E4 200 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 CNOT6LQ96LI5 555 aaKnown RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 XPO6Q96QU8 1125 aaKnown RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 VPS45Q9NRW7 570 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 DNAJC17Q9NVM6 304 aaKnown RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.05□□□□□ -1.283e-7■■■□□ 15.3
SCAF11-211ENST00000547950 TOR4AQ9NXH8 423 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 PLK2Q9NYY3 685 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 WDR35Q9P2L0 1181 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 ARMCX3Q9UH62 379 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 RASAL2Q9UJF2 1139 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 LSM7Q9UK45 103 aaKnown RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 PCDHGA5Q9Y5G8 931 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 TCRBV21S2A2A0A5A6 115 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 BCLAF3A2AJT9 711 aaKnown RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 SLC16A3O15427 465 aaKnown RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 TYRP14679 529 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 CD19P15391 556 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 NTSR1P30989 418 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 DHPSP49366 369 aaPredicted RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 TKTL1P51854 596 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 MCCD1P59942 119 aaPredicted RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 YWHAGP61981 247 aaKnown RBP eCLIP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 GUCA2AQ02747 115 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 LRRC63Q05C16 580 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 CUL2Q13617 745 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 GOLGA7BQ2TAP0 167 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 HSF5Q4G112 596 aaPredicted RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 STPG1Q5TH74 334 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 ARHGAP17Q68EM7 881 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 GRAMD4Q6IC98 578 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 SDE2Q6IQ49 451 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 KLHL10Q6JEL2 608 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 KLHDC10Q6PID8 442 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 TOGARAM2Q6ZUX3 1019 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 RSRC2Q7L4I2 434 aaKnown RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 ARMCX6Q7L4S7 300 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 CCDC186Q7Z3E2 898 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 RASSF3Q86WH2 238 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 ETFBKMTQ8IXQ9 262 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 TMEFF1Q8IYR6 380 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 CHPFQ8IZ52 775 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 PHTF2Q8N3S3 785 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 DEFB119Q8N690 84 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 ZNF513Q8N8E2 541 aaPredicted RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 ANKRD52Q8NB46 1076 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 SPATA20Q8TB22 786 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 UBA3Q8TBC4 463 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 PIGKQ92643 395 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 DHTKD1Q96HY7 919 aaPredicted RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 FAXDC2Q96IV6 333 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 TIGD1Q96MW7 591 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 ACOX2Q99424 681 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 GTPBP4Q9BZE4 634 aaKnown RBP7.04□□□□□ -1.28
SCAF11-211ENST00000547950 UBXN6Q9BZV1 441 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 PNPLA8Q9NP80 782 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 HESX1Q9UBX0 185 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 DACH1Q9UI36 760 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 MAN1B1Q9UKM7 699 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 USP3Q9Y6I4 520 aa7.04□□□□□ -1.28
SCAF11-211ENST00000547950 MIA3Q5JRA6 1907 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 SLC12A8A0AV02 714 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 C4orf47A7E2U8 309 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 WASH3PC4AMC7 463 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 TULP2O00295 520 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 BIN1O00499 593 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 PSMA7O14818 248 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 KHNYNO15037 678 aaKnown RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 STC2O76061 302 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 ZBED1O96006 694 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 KLKB1P03952 638 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 CISD3P0C7P0 127 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 LCP1P13796 627 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 DGKGP49619 791 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 YWHAEP62258 255 aaKnown RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 COG7P83436 770 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 PDE4CQ08493 712 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 BYSLQ13895 437 aaKnown RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 CCDC40Q4G0X9 1142 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms