RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CDH5P33151 784 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 STAT1P42224 750 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 TRIP4Q15650 581 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 NFKBIBQ15653 356 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 ANO4Q32M45 955 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 PTPN20Q4JDL3 420 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 FILIP1LQ4L180 1135 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 MAMSTRQ6ZN01 415 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 C12orf40Q86WS4 652 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 DENND1CQ8IV53 801 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 TMEM35BQ8NCS4 154 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 EZH1Q92800 747 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 ATOH1Q92858 354 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 PIWIL1Q96J94 861 aaKnown RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 NAP1L5Q96NT1 182 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 AGO1Q9UL18 857 aaKnown RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 NAALADL1Q9UQQ1 740 aa19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 A0A1B0GTH6 734 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 ERBB2P04626 1255 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 MMEP08473 750 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 EIF2DP41214 584 aaKnown RBP19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 TPM4P67936 248 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 TAF5Q15542 800 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 TPGS1Q6ZTW0 290 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 BEND5Q7L4P6 421 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 SPEM1Q8N4L4 309 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 NAT16Q8N8M0 369 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 SLC20A1Q8WUM9 679 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 FAM86C1Q9NVL1 165 aa19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 NOCTQ9UK39 431 aaKnown RBP19.55■□□□□ 0.72
PRPF40B-206ENST00000547764 SERPINC1P01008 464 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 SP9P0CG40 484 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 HARS2P49590 506 aaKnown RBP19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 SNX16P57768 344 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 YWHAZP63104 245 aaKnown RBP19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 MESP2Q0VG99 397 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 FBXO43Q4G163 708 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 SYPL2Q5VXT5 272 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 FAM183BPQ6ZVS7 135 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 ZNF677Q86XU0 584 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 ETFBKMTQ8IXQ9 262 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 DQX1Q8TE96 717 aaKnown RBP19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 PNKPQ96T60 521 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 TRIM62Q9BVG3 475 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 BBS2Q9BXC9 721 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 SYNCQ9H7C4 482 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 POPDC2Q9HBU9 364 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 PRMT8Q9NR22 394 aaPredicted RBP19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 MARK1Q9P0L2 795 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 WDR35Q9P2L0 1181 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 FBXO4Q9UKT5 387 aa19.54■□□□□ 0.72
PRPF40B-206ENST00000547764 ATG2BQ96BY7 2078 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 FAM170AA1A519 330 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 NEDD8-MDP1E9PL57 170 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 GOLGA6L19H0YKK7 550 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 CAPN9O14815 690 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 RNF40O75150 1001 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 LSM8O95777 96 aaKnown RBP19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 CHRNB2P17787 502 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 CHKAP35790 457 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 PLA2G5P39877 138 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 CCR3P51677 355 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 CDR2Q01850 454 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 CSTF1Q05048 431 aaKnown RBP19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 NR1I3Q14994 352 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 OR6B2Q6IFH4 312 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 PKN3Q6P5Z2 889 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 OLFML1Q6UWY5 402 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 CACNA2D4Q7Z3S7 1137 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 IPO4Q8TEX9 1081 aaKnown RBP19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 FAM122AQ96E09 287 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 P2RY11Q96G91 374 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 C2orf42Q9NWW7 574 aa19.53■□□□□ 0.72
PRPF40B-206ENST00000547764 A0A1W2PQC6 194 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 K7EQS6 105 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 TULP3O75386 442 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 KAT7O95251 611 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 IGLV3-27P01718 113 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 GLI1P08151 1106 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 TYRP14679 529 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 CXCL12P48061 93 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 TBX4P57082 545 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 FANCCQ00597 558 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 FMO1Q01740 532 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 SATB1Q01826 763 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 ARID5AQ03989 594 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 KDSRQ06136 332 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 EFHC1Q5JVL4 640 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 TSSK4Q6SA08 328 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 TAC4Q86UU9 113 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 ERICH1Q86X53 443 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 SFTPA1Q8IWL2 248 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 FAM217AQ8IXS0 508 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 PHTF2Q8N3S3 785 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 ADAM32Q8TC27 787 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 BHMTQ93088 406 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 PHOX2BQ99453 314 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 ARHGEF4Q9NR80 690 aa19.52■□□□□ 0.72
PRPF40B-206ENST00000547764 ASNSD1Q9NWL6 643 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms