RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 DAB2IPQ5VWQ8 1189 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 GRHL2Q6ISB3 625 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 MEPCEQ7L2J0 689 aaKnown RBP3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 SRGAP1Q7Z6B7 1085 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 MMP21Q8N119 569 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 SDR16C5Q8N3Y7 309 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 TRMT61AQ96FX7 289 aaKnown RBP3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 PRR11Q96HE9 360 aaPredicted RBP3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 MSLNLQ96KJ4 702 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 LYZL4Q96KX0 146 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 SNX22Q96L94 193 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 PCGF6Q9BYE7 350 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 TBC1D23Q9NUY8 699 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 TMEM45AQ9NWC5 275 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 WWOXQ9NZC7 414 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 DDX20Q9UHI6 824 aaKnown RBP3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 LRP12Q9Y561 859 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 SPATA31A1Q5TZJ5 1347 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 COL15A1P39059 1388 aa3.85□□□□□ -1.79
RAB3IP-209ENST00000547055 C2CD4BA6NLJ0 364 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 TPP1O14773 563 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 USP12O75317 370 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 ZBED1O96006 694 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 TOMM40O96008 361 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 NANOS2P60321 138 aaKnown RBP3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 FAM193AP78312 1265 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 SEMA3AQ14563 771 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 PLEKHG6Q3KR16 790 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 LVRNQ6Q4G3 990 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 ACRBPQ8NEB7 543 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 MBD3L2Q8NHZ7 208 aaPredicted RBP3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 PIGKQ92643 395 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 FAM227BQ96M60 508 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 FCRL5Q96RD9 977 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 SELENOOQ9BVL4 669 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 SLC25A32Q9H2D1 315 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 SAP30LQ9HAJ7 183 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 METTL14Q9HCE5 456 aaKnown RBP3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 SEMA5BQ9P283 1151 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 VPS4AQ9UN37 437 aa3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 HEMK1Q9Y5R4 338 aaPredicted RBP3.84□□□□□ -1.79
RAB3IP-209ENST00000547055 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 MBPP02686 304 aaPredicted RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 HRGP04196 525 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 S100BP04271 92 aaPredicted RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 IL6STP40189 918 aaPredicted RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 RAE1P78406 368 aaKnown RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 B4GALNT1Q00973 533 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 MTAPQ13126 283 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 MANEAQ5SRI9 462 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 ZNF549Q6P9A3 640 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 FAM57BQ71RH2 274 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 RNF44Q7L0R7 432 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 CHST15Q7LFX5 561 aaPredicted RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 TFAP2DQ7Z6R9 452 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 WIPF2Q8TF74 440 aaPredicted RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 NLRP4Q96MN2 994 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 AGO4Q9HCK5 861 aaKnown RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 MLXIPLQ9NP71 852 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 SEMA4BQ9NPR2 832 aaPredicted RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 ZBTB40Q9NUA8 1239 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 EID1Q9Y6B2 187 aa3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 SIRT4Q9Y6E7 314 aaPredicted RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 FRMPD2Q68DX3 1309 aaPredicted RBP3.83□□□□□ -1.8
RAB3IP-209ENST00000547055 TTBK1Q5TCY1 1321 aaPredicted RBP3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 SLC22A23A1A5C7 686 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 C16orf96A6NNT2 1141 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 VSTM5A8MXK1 200 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 F8W8V4 182 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 RPL17P18621 184 aaKnown RBP3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 RPS6KB1P23443 525 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 HOXA7P31268 230 aaPredicted RBP3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 VPS41P49754 854 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 DGKQP52824 942 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 SLC12A2P55011 1212 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 MTA1Q13330 715 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 FHL3Q13643 280 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 GRM3Q14832 879 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 ACOX1Q15067 660 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 CNGA3Q16281 694 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 AASDHQ4L235 1098 aaPredicted RBP3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 SUN3Q8TAQ9 357 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 BCAS4Q8TDM0 211 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 SLC25A28Q96A46 364 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 STRBPQ96SI9 672 aaKnown RBP3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 HIPK2Q9H2X6 1198 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 HEYLQ9NQ87 328 aaPredicted RBP3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 TCEAL9Q9UHQ7 104 aa3.82□□□□□ -1.8
RAB3IP-209ENST00000547055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.81□□□□□ -1.8
RAB3IP-209ENST00000547055 GOLGA6CA6NDK9 693 aa3.81□□□□□ -1.8
RAB3IP-209ENST00000547055 GOLGA6BA6NDN3 693 aa3.81□□□□□ -1.8
RAB3IP-209ENST00000547055 TTC34A8MYJ7 566 aa3.81□□□□□ -1.8
RAB3IP-209ENST00000547055 SMAD6O43541 496 aaKnown RBP3.81□□□□□ -1.8
RAB3IP-209ENST00000547055 SYF2O95926 243 aaKnown RBP3.81□□□□□ -1.8
RAB3IP-209ENST00000547055 ANXA2P07355 339 aaKnown RBP3.81□□□□□ -1.8
RAB3IP-209ENST00000547055 GOLGA6DP0CG33 693 aa3.81□□□□□ -1.8
RAB3IP-209ENST00000547055 ST6GAL1P15907 406 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms