RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 CA12O43570 354 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 MGEA5O60502 916 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 PRAMEF2O60811 474 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 INMTO95050 263 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 MBPP02686 304 aaPredicted RBP4.96□□□□□ -1.62
CCDC38-204ENST00000546816 FGF2P09038 288 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 RHCEP18577 417 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 ADRA1DP25100 572 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 RHDQ02161 417 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 MTX1Q13505 466 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 ST3GAL2Q16842 350 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 GRHL2Q6ISB3 625 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 ZNF549Q6P9A3 640 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 SNX22Q96L94 193 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 VPS33BQ9H267 617 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 OBP2AQ9NY56 170 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 TCEAL9Q9UHQ7 104 aa4.96□□□□□ -1.62
CCDC38-204ENST00000546816 CYSRT1A8MQ03 144 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 CDKN2AP42771 156 aaKnown RBP4.95□□□□□ -1.62
CCDC38-204ENST00000546816 EIF4A1P60842 406 aaKnown RBP4.95□□□□□ -1.62
CCDC38-204ENST00000546816 CLCA4Q14CN2 919 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 GFOD2Q3B7J2 385 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 DAB2IPQ5VWQ8 1189 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 MZT2AQ6P582 158 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 Q6ZTC4 211 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 C18orf65Q6ZTR6 163 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 MMP21Q8N119 569 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 TTC8Q8TAM2 541 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 PRR11Q96HE9 360 aaPredicted RBP4.95□□□□□ -1.62
CCDC38-204ENST00000546816 FAM227BQ96M60 508 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 MLXIPQ9HAP2 919 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 USP29Q9HBJ7 922 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 VPS45Q9NRW7 570 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 TBC1D23Q9NUY8 699 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 HPSEQ9Y251 543 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 PCDHGB6Q9Y5F9 930 aa4.95□□□□□ -1.62
CCDC38-204ENST00000546816 SHROOM4Q9ULL8 1493 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.94□□□□□ -1.62
CCDC38-204ENST00000546816 EME2A4GXA9 379 aaPredicted RBP4.94□□□□□ -1.62
CCDC38-204ENST00000546816 GOLGA6CA6NDK9 693 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 GOLGA6BA6NDN3 693 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 SNX2O60749 519 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 GOLGA6DP0CG33 693 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 RBL1P28749 1068 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 YPEL5P62699 121 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 MTAPQ13126 283 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 DNASE1L3Q13609 305 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 ADHFE1Q8IWW8 467 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 SDR16C5Q8N3Y7 309 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 NGDNQ8NEJ9 315 aaKnown RBP4.94□□□□□ -1.62
CCDC38-204ENST00000546816 IPCEF1Q8WWN9 437 aaPredicted RBP4.94□□□□□ -1.62
CCDC38-204ENST00000546816 HIC2Q96JB3 615 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 VPS50Q96JG6 964 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 STRBPQ96SI9 672 aaKnown RBP4.94□□□□□ -1.62
CCDC38-204ENST00000546816 BTBD1Q9H0C5 482 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 GOLGA6AQ9NYA3 693 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 ZNF212Q9UDV6 495 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 MAFFQ9ULX9 164 aa4.94□□□□□ -1.62
CCDC38-204ENST00000546816 A0A087WZ62 844 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 ANXA2P07355 339 aaKnown RBP4.93□□□□□ -1.62
CCDC38-204ENST00000546816 T-ENOLP0DO92 83 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 TMEM225BP0DP42 221 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 RPL17P18621 184 aaKnown RBP4.93□□□□□ -1.62
CCDC38-204ENST00000546816 HSF1Q00613 529 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 HYAL1Q12794 435 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 SLC9C1Q4G0N8 1177 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 CC2D1BQ5T0F9 858 aaKnown RBP4.93□□□□□ -1.62
CCDC38-204ENST00000546816 FAM71DQ8N9W8 422 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 SUN3Q8TAQ9 357 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 PHKBQ93100 1093 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 APOL5Q9BWW9 433 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 SAP30LQ9HAJ7 183 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 MLXIPLQ9NP71 852 aa4.93□□□□□ -1.62
CCDC38-204ENST00000546816 SEMA4BQ9NPR2 832 aaPredicted RBP4.93□□□□□ -1.62
CCDC38-204ENST00000546816 C16orf96A6NNT2 1141 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 C4orf47A7E2U8 309 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 RRHO14718 337 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 KRT86O43790 486 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 WDR47O94967 919 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 MT3P25713 68 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 GALNSP34059 522 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 TXNL4AP83876 142 aaKnown RBP4.92□□□□□ -1.62
CCDC38-204ENST00000546816 CCDC15Q0P6D6 951 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 KRT81Q14533 505 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 ACOX1Q15067 660 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 PPP4R4Q6NUP7 873 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 RNF44Q7L0R7 432 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.92□□□□□ -1.62
CCDC38-204ENST00000546816 B4GALNT2Q8NHY0 566 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 MBD3L2Q8NHZ7 208 aaPredicted RBP4.92□□□□□ -1.62
CCDC38-204ENST00000546816 UNKQ9C0B0 810 aaKnown RBP4.92□□□□□ -1.62
CCDC38-204ENST00000546816 AGO4Q9HCK5 861 aaKnown RBP4.92□□□□□ -1.62
CCDC38-204ENST00000546816 PRDM11Q9NQV5 511 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 TTBK1Q5TCY1 1321 aaPredicted RBP4.92□□□□□ -1.62
CCDC38-204ENST00000546816 SPATA31A1Q5TZJ5 1347 aa4.92□□□□□ -1.62
CCDC38-204ENST00000546816 IGLV5-39A0A0G2JS06 123 aa4.91□□□□□ -1.62
CCDC38-204ENST00000546816 CBFA2T3O75081 653 aa4.91□□□□□ -1.62
CCDC38-204ENST00000546816 TMIGD3P0DMS9 266 aaPredicted RBP4.91□□□□□ -1.62
CCDC38-204ENST00000546816 TACR3P29371 465 aa4.91□□□□□ -1.62
CCDC38-204ENST00000546816 STIM1Q13586 685 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms