RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ACSS3Q9H6R3 686 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 KCNK13Q9HB14 408 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 ZNF112Q9UJU3 913 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 FOCADQ5VW36 1801 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 KCNK1O00180 336 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 STAMBPO95630 424 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 ACADSP16219 412 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 OSBPP22059 807 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 MMP8P22894 467 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 ADORA2BP29275 332 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 TYK2P29597 1187 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 CA9Q16790 459 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 CNPY1Q3B7I2 92 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 PPM1LQ5SGD2 360 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 IRGCQ6NXR0 463 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 CATSPERGQ6ZRH7 1159 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 PHTF2Q8N3S3 785 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 OPTNQ96CV9 577 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 CPB2Q96IY4 423 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 R3HDMLQ9H3Y0 253 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 COPS7BQ9H9Q2 264 aaPredicted RBP15.17■□□□□ 0.02
HOXC11-202ENST00000546378 IL1RL2Q9HB29 575 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 FER1L6Q2WGJ9 1857 aa15.17■□□□□ 0.02
HOXC11-202ENST00000546378 POLR2AP24928 1970 aaKnown RBP15.17■□□□□ 0.02
HOXC11-202ENST00000546378 GLTPD2A6NH11 291 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 CYP1A1P04798 512 aaPredicted RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 PSAPP07602 524 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 TFE3P19532 575 aaPredicted RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 ACVR2BQ13705 512 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 CTC1Q2NKJ3 1217 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 DNAAF3Q8N9W5 541 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 RXFP2Q8WXD0 754 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 EZH1Q92800 747 aaPredicted RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 APOPT1Q96IL0 206 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 ECSITQ9BQ95 431 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 RRAGCQ9HB90 399 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 XAB2Q9HCS7 855 aaKnown RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 PXMP2Q9NR77 195 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 WDR35Q9P2L0 1181 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 C9JVG2 144 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 PRPF4O43172 522 aaKnown RBP eCLIP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 C4BPAP04003 597 aaKnown RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 ERBB2P04626 1255 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 PGK2P07205 417 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 HADHBP55084 474 aaKnown RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 ROR2Q01974 943 aaKnown RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 SP2Q02086 613 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 PDCD2Q16342 344 aaPredicted RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 ANKRD13AQ8IZ07 590 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 ST13P4Q8IZP2 240 aaPredicted RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 PPWD1Q96BP3 646 aaKnown RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 TDRKHQ9Y2W6 561 aaKnown RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 SNRPAP09012 282 aaKnown RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 CYP2C8P10632 490 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 RPS6KA3P51812 740 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 NCKAP1LP55160 1127 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 GBE1Q04446 702 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 NFIL3Q16649 462 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 KCTD21Q4G0X4 260 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 TMEM198Q66K66 360 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 WDR75Q8IWA0 830 aaKnown RBP15.16■□□□□ 0.02
HOXC11-202ENST00000546378 ICA1LQ8NDH6 482 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 MCUQ8NE86 351 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 HIC2Q96JB3 615 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 LGMNQ99538 433 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 ZNF302Q9NR11 478 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 KCND2Q9NZV8 630 aa15.16■□□□□ 0.02
HOXC11-202ENST00000546378 MAGEB3O15480 346 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 HSPA4LO95757 839 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 ITGBL1O95965 494 aaPredicted RBP15.15■□□□□ 0.02
HOXC11-202ENST00000546378 CALB1P05937 261 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 ACO1P21399 889 aaKnown RBP15.15■□□□□ 0.02
HOXC11-202ENST00000546378 PLEKHA7Q6IQ23 1121 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 EXT2Q93063 718 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 DCUN1D5Q9BTE7 237 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 WWP1Q9H0M0 922 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 SENP1Q9P0U3 644 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
HOXC11-202ENST00000546378 DGAT1O75907 488 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 TSPAN8P19075 237 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 KRT76Q01546 638 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 OASLQ15646 514 aaKnown RBP15.15■□□□□ 0.02
HOXC11-202ENST00000546378 LY6KQ17RY6 165 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 EFHC2Q5JST6 749 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 OR52E8Q6IFG1 317 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 CYP2R1Q6VVX0 501 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 RPS27LQ71UM5 84 aaKnown RBP15.15■□□□□ 0.02
HOXC11-202ENST00000546378 FAM131BQ86XD5 332 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 PYROXD2Q8N2H3 581 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 WDTC1Q8N5D0 677 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 ARFGAP1Q8N6T3 406 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 USP33Q8TEY7 942 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 EMID1Q96A84 441 aaPredicted RBP15.15■□□□□ 0.02
HOXC11-202ENST00000546378 MFSD14AQ96MC6 490 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 ADA2Q9NZK5 511 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 SHOC2Q9UQ13 582 aa15.15■□□□□ 0.02
HOXC11-202ENST00000546378 A0A1B0GTW7 788 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 AHCYL1O43865 530 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 MTA2O94776 668 aa15.14■□□□□ 0.01
HOXC11-202ENST00000546378 LMNAP02545 664 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms