RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RTP5Q14D33 572 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 WDR72Q3MJ13 1102 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 C6orf118Q5T5N4 469 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 Q6ZNB5 142 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 GATAD2AQ86YP4 633 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 SYCP3Q8IZU3 236 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 RBBP8NLQ8NC74 664 aaPredicted RBP9.92□□□□□ -0.82
CHD4-212ENST00000545083 ZMIZ2Q8NF64 920 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 SNIP1Q8TAD8 396 aaKnown RBP9.92□□□□□ -0.82
CHD4-212ENST00000545083 PRCCQ92733 491 aaPredicted RBP9.92□□□□□ -0.82
CHD4-212ENST00000545083 IGSF8Q969P0 613 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 SMOQ99835 787 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 ORAI3Q9BRQ5 295 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 SEMA4CQ9C0C4 833 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 OSER1Q9NX31 292 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 SEL1LQ9UBV2 794 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 FTSJ1Q9UET6 329 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.92□□□□□ -0.82
CHD4-212ENST00000545083 AK5Q9Y6K8 562 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 RRP8O43159 456 aaKnown RBP9.91□□□□□ -0.82
CHD4-212ENST00000545083 PAPSS1O43252 624 aaPredicted RBP9.91□□□□□ -0.82
CHD4-212ENST00000545083 BEST1O76090 585 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 ACADMP11310 421 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 GAP43P17677 238 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 LONP1P36776 959 aaKnown RBP9.91□□□□□ -0.82
CHD4-212ENST00000545083 CTSKP43235 329 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 TLE3Q04726 772 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 ZNF234Q14588 700 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 PRAMEF14Q5SWL7 426 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 HES3Q5TGS1 186 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 FYB2Q5VWT5 728 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 WDR49Q8IV35 697 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 SORCS1Q8WY21 1168 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 EPSTI1Q96J88 318 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 ZSCAN31Q96LW9 406 aaPredicted RBP9.91□□□□□ -0.82
CHD4-212ENST00000545083 PCED1AQ9H1Q7 454 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 NMUR1Q9HB89 426 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 OSGEPQ9NPF4 335 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 DMAP1Q9NPF5 467 aaPredicted RBP9.91□□□□□ -0.82
CHD4-212ENST00000545083 OLFML3Q9NRN5 406 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 KRT82Q9NSB4 513 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 LSM7Q9UK45 103 aaKnown RBP9.91□□□□□ -0.82
CHD4-212ENST00000545083 NUDT5Q9UKK9 219 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 CLEC4EQ9ULY5 219 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 SLC27A6Q9Y2P4 619 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 PCDHB13Q9Y5F0 798 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 PCDHGA1Q9Y5H4 931 aa9.91□□□□□ -0.82
CHD4-212ENST00000545083 CKAP5Q14008 2032 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 A0A1B0GTQ1 180 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 ZNF233A6NK53 670 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 ENC1O14682 589 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 NPC1O15118 1278 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 SYNCRIPO60506 623 aaKnown RBP9.9□□□□□ -0.82
CHD4-212ENST00000545083 AP1G2O75843 785 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 PENKP01210 267 aaPredicted RBP9.9□□□□□ -0.82
CHD4-212ENST00000545083 KLKB1P03952 638 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 FAM163BP0C2L3 166 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 DLATP10515 647 aaKnown RBP9.9□□□□□ -0.82
CHD4-212ENST00000545083 ACADVLP49748 655 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 ZNF132P52740 706 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 CDH8P55286 799 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 MYL6P60660 151 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 TNNC1P63316 161 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 CXADRP78310 365 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 CCDC173Q0VFZ6 552 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 ORC1Q13415 861 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 SHBQ15464 509 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 SURF1Q15526 300 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 TEAD4Q15561 434 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 TMEM215Q68D42 235 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 FBXL19Q6PCT2 694 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 GPRIN1Q7Z2K8 1008 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 SPACA3Q8IXA5 215 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 FUKQ8N0W3 1084 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 ZNF516Q92618 1163 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 FGF11Q92914 225 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 ELMO3Q96BJ8 720 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 BIRC7Q96CA5 298 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 SMARCD1Q96GM5 515 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 PIWIL1Q96J94 861 aaKnown RBP9.9□□□□□ -0.82
CHD4-212ENST00000545083 MED10Q9BTT4 135 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 NRSN2Q9GZP1 204 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 GZF1Q9H116 711 aaPredicted RBP9.9□□□□□ -0.82
CHD4-212ENST00000545083 XYLT2Q9H1B5 865 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 LHX5Q9H2C1 402 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 SMYD3Q9H7B4 428 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHD4-212ENST00000545083 COMMD8Q9NX08 183 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 ELOVL2Q9NXB9 296 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 HSPBP1Q9NZL4 362 aa9.9□□□□□ -0.82
CHD4-212ENST00000545083 NXF1Q9UBU9 619 aaKnown RBP9.9□□□□□ -0.82
CHD4-212ENST00000545083 PIEZO2Q9H5I5 2752 aa9.89□□□□□ -0.83
CHD4-212ENST00000545083 ATP8B3O60423 1300 aa9.89□□□□□ -0.83
CHD4-212ENST00000545083 FRMD3A2A2Y4 597 aa9.89□□□□□ -0.83
CHD4-212ENST00000545083 CYP26A1O43174 497 aa9.89□□□□□ -0.83
CHD4-212ENST00000545083 ARHGAP6O43182 974 aa9.89□□□□□ -0.83
CHD4-212ENST00000545083 BRINP1O60477 761 aa9.89□□□□□ -0.83
CHD4-212ENST00000545083 TSPAN3O60637 253 aa9.89□□□□□ -0.83
CHD4-212ENST00000545083 RFPL3O75679 317 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms