RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CPA2P48052 419 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 GCLCP48506 637 aaPredicted RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 AQP5P55064 265 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 USP10Q14694 798 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 MAPRE2Q15555 327 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 UGP2Q16851 508 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 C15orf59Q2T9L4 293 aaPredicted RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 ANO4Q32M45 955 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 FASTKD1Q53R41 847 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 SPANXN3Q5MJ09 141 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 SPOUT1Q5T280 376 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 MFSD14CQ5VZR4 134 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 NAPEPLDQ6IQ20 393 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CPNE8Q86YQ8 564 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 PLEKHO2Q8TD55 490 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 HTR3CQ8WXA8 447 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CD101Q93033 1021 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 ZNF669Q96BR6 464 aaPredicted RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 FIZ1Q96SL8 496 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 TSC22D4Q9Y3Q8 395 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 ZNF541Q9H0D2 1346 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 THSD7AQ9UPZ6 1657 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 MAGEA13PA6NCF6 341 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 H3BRB1 525 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 KRT75O95678 551 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 MPOP05164 745 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 APOA4P06727 396 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 RARBP10826 455 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 ADORA2AP29274 412 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 PMLP29590 882 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CDKN2BP42772 138 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 NOL9Q5SY16 702 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 GRTP1Q5TC63 336 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 SCUBE3Q8IX30 993 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 JOSD2Q8TAC2 188 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 PTPRN2Q92932 1015 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 TRPV6Q9H1D0 765 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 TUT1Q9H6E5 874 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 SETD4Q9NVD3 440 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 DEAF1O75398 565 aaPredicted RBP5.96□□□□□ -1.45
VPS50-220ENST00000544910 UNC5CO95185 931 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 PCSK1P29120 753 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 ECHS1P30084 290 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 SERPINB10P48595 397 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 COPAP53621 1224 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 RCN1Q15293 331 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 PREPLQ4J6C6 727 aaPredicted RBP5.96□□□□□ -1.45
VPS50-220ENST00000544910 SLC45A4Q5BKX6 768 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 FNBP1LQ5T0N5 605 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 DRICH1Q6PGQ1 229 aaPredicted RBP5.96□□□□□ -1.45
VPS50-220ENST00000544910 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.96□□□□□ -1.45
VPS50-220ENST00000544910 WNK4Q96J92 1243 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 PPP1R36Q96LQ0 422 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 RNF157Q96PX1 679 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 STRA6Q9BX79 667 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 LRRC4CQ9HCJ2 640 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 LTBP4Q8N2S1 1624 aa5.96□□□□□ -1.45
VPS50-220ENST00000544910 CNTNAP2Q9UHC6 1331 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 PDHXO00330 501 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 AP1G2O75843 785 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 SLC4A1P02730 911 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 NCALDP61601 193 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 MBTD1Q05BQ5 628 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 POU5F1BQ06416 359 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 MMRN1Q13201 1228 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 ACVR2BQ13705 512 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 PTPN20Q4JDL3 420 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 POTEAQ6S8J7 498 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 UNC93AQ86WB7 457 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 ZNF398Q8TD17 642 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 DDX1Q92499 740 aaKnown RBP5.96□□□□□ -1.46
VPS50-220ENST00000544910 LRRC39Q96DD0 335 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 HIC2Q96JB3 615 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 CPNE1Q99829 537 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 ACSS3Q9H6R3 686 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 WDCPQ9H6R7 721 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 LRRC40Q9H9A6 602 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 ARHGEF38Q9NXL2 777 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 EFR3BQ9Y2G0 817 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 DNAJC16Q9Y2G8 782 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 C2CD2Q9Y426 696 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.96□□□□□ -1.46
VPS50-220ENST00000544910 NEMP1O14524 444 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 CILPO75339 1184 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 WFS1O76024 890 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 CST3P01034 146 aaPredicted RBP5.96□□□□□ -1.46
VPS50-220ENST00000544910 GJB1P08034 283 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 EPHX2P34913 555 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 PTPN7P35236 360 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 SLC1A6P48664 564 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 RNASEH2BQ5TBB1 312 aaKnown RBP5.96□□□□□ -1.46
VPS50-220ENST00000544910 PIGWQ7Z7B1 504 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 FAM131BQ86XD5 332 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 SCUBE1Q8IWY4 988 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 KIAA2013Q8IYS2 634 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 NIPA2Q8N8Q9 360 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 TEKT4Q8WW24 435 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 CDCA5Q96FF9 252 aa5.96□□□□□ -1.46
VPS50-220ENST00000544910 TSPAN17Q96FV3 270 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms