RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 SLC35G2Q8TBE7 412 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 DQX1Q8TE96 717 aaKnown RBP13.66□□□□□ -0.22
DDX11-227ENST00000544652 RNF139Q8WU17 664 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 RXFP2Q8WXD0 754 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 CENPIQ92674 756 aaPredicted RBP13.66□□□□□ -0.22
DDX11-227ENST00000544652 ZFRQ96KR1 1074 aaKnown RBP13.66□□□□□ -0.22
DDX11-227ENST00000544652 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 MYADMQ96S97 322 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 CYP2S1Q96SQ9 504 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 NUP85Q9BW27 656 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
DDX11-227ENST00000544652 KLF16Q9BXK1 252 aaPredicted RBP13.66□□□□□ -0.22
DDX11-227ENST00000544652 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 TRPV4Q9HBA0 871 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 THEGQ9P2T0 379 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 DNMT3LQ9UJW3 386 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 NUDT5Q9UKK9 219 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 STAP1Q9ULZ2 295 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 TFR2Q9UP52 801 aa13.66□□□□□ -0.22
DDX11-227ENST00000544652 TRUB2O95900 331 aaKnown RBP13.65□□□□□ -0.22
DDX11-227ENST00000544652 TBX18O95935 607 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 IGLV3-27P01718 113 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 CCDC175P0C221 793 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 LAMP2P13473 410 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 PDGFRAP16234 1089 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 ZNF143P52747 638 aaPredicted RBP13.65□□□□□ -0.22
DDX11-227ENST00000544652 PITX1P78337 314 aaPredicted RBP13.65□□□□□ -0.22
DDX11-227ENST00000544652 ZXDBP98169 803 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 TFF2Q03403 129 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 ZNF252P-AS1Q0IIN9 211 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 CCDC14Q49A88 953 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 C10orf120Q5SQS8 335 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 DCUN1D2Q6PH85 259 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 RSRC2Q7L4I2 434 aaKnown RBP13.65□□□□□ -0.22
DDX11-227ENST00000544652 STRADAQ7RTN6 431 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 KIAA1328Q86T90 577 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 TAC4Q86UU9 113 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 TXLNBQ8N3L3 684 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 ZSCAN18Q8TBC5 510 aaPredicted RBP13.65□□□□□ -0.22
DDX11-227ENST00000544652 ZNF564Q8TBZ8 553 aaPredicted RBP13.65□□□□□ -0.22
DDX11-227ENST00000544652 CFAP57Q96MR6 1250 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 ASB16Q96NS5 453 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 LACRTQ9GZZ8 138 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 TRPC7Q9HCX4 862 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 OSGEPQ9NPF4 335 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 MARCH2Q9P0N8 246 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 CALCOCO1Q9P1Z2 691 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 EPS15L1Q9UBC2 864 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 SFMBT1Q9UHJ3 866 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 COL4A3Q01955 1670 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 CHD5Q8TDI0 1954 aa13.65□□□□□ -0.22
DDX11-227ENST00000544652 A0A0U1RQJ8 604 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 MDM4O15151 490 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 IRAK2O43187 625 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 CKMP06732 381 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 MBL2P11226 248 aaPredicted RBP13.64□□□□□ -0.23
DDX11-227ENST00000544652 TFE3P19532 575 aaPredicted RBP13.64□□□□□ -0.23
DDX11-227ENST00000544652 FCARP24071 287 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 SDC4P31431 198 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 AVPR1AP37288 418 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 EFEMP1Q12805 493 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 ACAP1Q15027 740 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 AAK1Q2M2I8 961 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 OTOP3Q7RTS5 596 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 ARID3BQ8IVW6 561 aaPredicted RBP13.64□□□□□ -0.23
DDX11-227ENST00000544652 KIAA1958Q8N8K9 716 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 NIPA2Q8N8Q9 360 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 ATRIPQ8WXE1 791 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
DDX11-227ENST00000544652 SLC39A13Q96H72 371 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 CALR3Q96L12 384 aaKnown RBP13.64□□□□□ -0.23
DDX11-227ENST00000544652 SERPINB11Q96P15 392 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 TBCBQ99426 244 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 CNPY3Q9BT09 278 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 TRIM7Q9C029 511 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 KIF9Q9HAQ2 790 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 TDP1Q9NUW8 608 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 OBP2AQ9NY56 170 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 LCMT1Q9UIC8 334 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 RASAL2Q9UJF2 1139 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 SALL4Q9UJQ4 1053 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 ANAPC7Q9UJX3 599 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 TLR6Q9Y2C9 796 aa13.64□□□□□ -0.23
DDX11-227ENST00000544652 HBS1LQ9Y450 684 aaKnown RBP13.64□□□□□ -0.23
DDX11-227ENST00000544652 C5orf42Q9H799 3197 aa13.63□□□□□ -0.23
DDX11-227ENST00000544652 M0QYT0 321 aa13.63□□□□□ -0.23
DDX11-227ENST00000544652 HAX1O00165 279 aa13.63□□□□□ -0.23
DDX11-227ENST00000544652 CCP110O43303 1012 aa13.63□□□□□ -0.23
DDX11-227ENST00000544652 PRAMEF12O95522 483 aa13.63□□□□□ -0.23
DDX11-227ENST00000544652 F9P00740 461 aa13.63□□□□□ -0.23
DDX11-227ENST00000544652 IL9P15248 144 aa13.63□□□□□ -0.23
DDX11-227ENST00000544652 GBP1P32455 592 aa13.63□□□□□ -0.23
DDX11-227ENST00000544652 GBP2P32456 591 aaPredicted RBP13.63□□□□□ -0.23
DDX11-227ENST00000544652 ARHGAP25P42331 645 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms