RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SH3GL2Q99962 352 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 CWC15Q9P013 229 aaKnown RBP20.61■□□□□ 0.89
COPS7A-218ENST00000543939 RCOR3Q9P2K3 495 aaPredicted RBP20.61■□□□□ 0.89
COPS7A-218ENST00000543939 ANAPC5Q9UJX4 755 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 H7C4K7 107 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 TRIM66O15016 1216 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 KIAA0355O15063 1070 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 AIF1P55008 147 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 IZUMO3Q5VZ72 239 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 C1orf228Q6PIY5 440 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 TOP1MTQ969P6 601 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 TTPALQ9BTX7 342 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 C10orf88Q9H8K7 445 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 TMPRSS4Q9NRS4 437 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 ATP8A1Q9Y2Q0 1164 aa20.6■□□□□ 0.89
COPS7A-218ENST00000543939 F9P00740 461 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 ADRA1BP35368 520 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 ALDH7A1P49419 539 aaKnown RBP20.59■□□□□ 0.89
COPS7A-218ENST00000543939 GDF10P55107 478 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 SCAPQ12770 1279 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 P3H1Q32P28 736 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 RSPO2Q6UXX9 243 aaPredicted RBP20.59■□□□□ 0.89
COPS7A-218ENST00000543939 ANKS3Q6ZW76 656 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 NECAB2Q7Z6G3 386 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 RIN2Q8WYP3 895 aaPredicted RBP20.59■□□□□ 0.89
COPS7A-218ENST00000543939 PGLYRP2Q96PD5 576 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 OXCT2Q9BYC2 517 aaPredicted RBP20.59■□□□□ 0.89
COPS7A-218ENST00000543939 DDIT4Q9NX09 232 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 FBXW11Q9UKB1 542 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 PLAAQ9Y263 795 aa20.59■□□□□ 0.89
COPS7A-218ENST00000543939 DNALI1O14645 258 aaPredicted RBP20.58■□□□□ 0.89
COPS7A-218ENST00000543939 ZFXP17010 805 aaPredicted RBP20.58■□□□□ 0.89
COPS7A-218ENST00000543939 ARL4AP40617 200 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 GPR15P49685 360 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 PMS2P54278 862 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 YWHAGP61981 247 aaKnown RBP eCLIP20.58■□□□□ 0.89
COPS7A-218ENST00000543939 GPR17Q13304 367 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 EFHC2Q5JST6 749 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 HIBCHQ6NVY1 386 aaPredicted RBP20.58■□□□□ 0.89
COPS7A-218ENST00000543939 LRIG3Q6UXM1 1119 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 UNC45BQ8IWX7 931 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 ATAD1Q8NBU5 361 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 UBLCP1Q8WVY7 318 aaPredicted RBP20.58■□□□□ 0.89
COPS7A-218ENST00000543939 RSAD2Q8WXG1 361 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 ZNF689Q96CS4 500 aaPredicted RBP20.58■□□□□ 0.89
COPS7A-218ENST00000543939 ADAM7Q9H2U9 754 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 FAM204AQ9H8W3 233 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 PRDM16Q9HAZ2 1276 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 AAASQ9NRG9 546 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 GREB1Q4ZG55 1949 aa20.58■□□□□ 0.89
COPS7A-218ENST00000543939 H0YGN5 161 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 IFNB1P01574 187 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 IGLV3-25P01717 112 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 CSF2RAP15509 400 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 GOT1P17174 413 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 CXCR3P49682 368 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 ROR1Q01973 937 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 SMARCB1Q12824 385 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 IFRD2Q12894 506 aaPredicted RBP20.58■□□□□ 0.88
COPS7A-218ENST00000543939 GPS1Q13098 491 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 SLMAPQ14BN4 828 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 DDR2Q16832 855 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 SCD5Q86SK9 330 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 TAC4Q86UU9 113 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 RNF168Q8IYW5 571 aaPredicted RBP20.58■□□□□ 0.88
COPS7A-218ENST00000543939 NUP93Q8N1F7 819 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 TTC9BQ8N6N2 239 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 DQX1Q8TE96 717 aaKnown RBP20.58■□□□□ 0.88
COPS7A-218ENST00000543939 RNF139Q8WU17 664 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 RUFY1Q96T51 708 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 EPB41L4BQ9H329 900 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 ANLNQ9NQW6 1124 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 PRDM5Q9NQX1 630 aaPredicted RBP20.58■□□□□ 0.88
COPS7A-218ENST00000543939 ABCC13Q9NSE7 274 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.58■□□□□ 0.88
COPS7A-218ENST00000543939 NFS1Q9Y697 457 aa20.58■□□□□ 0.88
COPS7A-218ENST00000543939 MTMR11A4FU01 709 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 H3BRJ5 948 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 I6L893 689 aaPredicted RBP20.57■□□□□ 0.88
COPS7A-218ENST00000543939 OPA1O60313 960 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 VNN2O95498 520 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 AMHP03971 560 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 RARGP13631 454 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 CPB1P15086 417 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 CAPN2P17655 700 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 AMPD1P23109 780 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 ARPP19P56211 112 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 SDHAF4Q5VUM1 108 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 DARS2Q6PI48 645 aaKnown RBP20.57■□□□□ 0.88
COPS7A-218ENST00000543939 ZC3H18Q86VM9 953 aaKnown RBP20.57■□□□□ 0.88
COPS7A-218ENST00000543939 SPPL2BQ8TCT7 592 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 IGSF21Q96ID5 467 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 VN1R3Q9BXE9 311 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 TSPYL1Q9H0U9 437 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 RC3H2Q9HBD1 1191 aaKnown RBP20.57■□□□□ 0.88
COPS7A-218ENST00000543939 IL37Q9NZH6 218 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 SCML2Q9UQR0 700 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 HEY1Q9Y5J3 304 aa20.57■□□□□ 0.88
COPS7A-218ENST00000543939 H7C0C1 242 aa20.56■□□□□ 0.88
COPS7A-218ENST00000543939 STIP1P31948 543 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms