RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MAP3K6O95382 1288 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 ALDH2P05091 517 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 XRCC1P18887 633 aaPredicted RBP13.08□□□□□ -0.32
SMG8-202ENST00000543872 FGFR3P22607 806 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 CDK9P50750 372 aaKnown RBP13.08□□□□□ -0.32
SMG8-202ENST00000543872 PRAMEP78395 509 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 TUBB3Q13509 450 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 ADGRE1Q14246 886 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 TGFBIQ15582 683 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 CYP4A22Q5TCH4 519 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 TMEM214Q6NUQ4 689 aaKnown RBP13.08□□□□□ -0.32
SMG8-202ENST00000543872 DARS2Q6PI48 645 aaKnown RBP13.08□□□□□ -0.32
SMG8-202ENST00000543872 MIER3Q7Z3K6 550 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 LILRA2Q8N149 483 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 TRNAU1APQ9NX07 287 aaKnown RBP13.08□□□□□ -0.32
SMG8-202ENST00000543872 EBF1Q9UH73 591 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 CROCCQ5TZA2 2017 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 ZNF536O15090 1300 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 SNNO75324 88 aaPredicted RBP13.08□□□□□ -0.32
SMG8-202ENST00000543872 CSPG5O95196 566 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 CLPPQ16740 277 aaPredicted RBP13.08□□□□□ -0.32
SMG8-202ENST00000543872 PDCD4Q53EL6 469 aaKnown RBP13.08□□□□□ -0.32
SMG8-202ENST00000543872 XKR5Q6UX68 686 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 ABRAQ8N0Z2 381 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 CALN1Q9BXU9 219 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 TRPV5Q9NQA5 729 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 RAB6BQ9NRW1 208 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 SORCS3Q9UPU3 1222 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 NFASCO94856 1347 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 GOLGA8QA0A0J9YX86 632 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 GOLGA8OA6NCC3 632 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 GOLGA8NF8WBI6 632 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 ENO3P13929 434 aaPredicted RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 GMPRP36959 345 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 CACNB3P54284 484 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 ZNF252P-AS1Q0IIN9 211 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 IQCF2Q8IXL9 164 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 BHLHE22Q8NFJ8 381 aaPredicted RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 CENPOQ9BU64 300 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 TEKT3Q9BXF9 490 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 SMYD2Q9NRG4 433 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 EPS15L1Q9UBC2 864 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 RBMX2Q9Y388 322 aaKnown RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 COQ4Q9Y3A0 265 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 NAV1Q8NEY1 1877 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 CNTNAP2Q9UHC6 1331 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 ARHGEF37A1IGU5 675 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 FUOMA2VDF0 154 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 TMEM191CA6NGB0 347 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 ADAM23O75077 832 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 TMEM191BP0C7N4 346 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 SOX10P56693 466 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 ABCB5Q2M3G0 1257 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 TEDDM1Q5T9Z0 273 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 ANGEL2Q5VTE6 544 aaKnown RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 ELMSAN1Q6PJG2 1045 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 NPNTQ6UXI9 565 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 TPTE2Q6XPS3 522 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 KIAA1522Q9P206 1035 aaPredicted RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 HESX1Q9UBX0 185 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 SLC9A2Q9UBY0 812 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 SSX2IPQ9Y2D8 614 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 ZBTB11O95625 1053 aaPredicted RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 OXSR1O95747 527 aaPredicted RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 CSH1P0DML2 217 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 CSH2P0DML3 217 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 NDST2P52849 883 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 THOP1P52888 689 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 NUP107P57740 925 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 SLC10A5Q5PT55 438 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 TRMT10BQ6PF06 316 aaKnown RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 FAM156AQ8NDB6 213 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 CASP10Q92851 521 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 PGBD4Q96DM1 585 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
SMG8-202ENST00000543872 TEX264Q9Y6I9 313 aa13.07□□□□□ -0.32
SMG8-202ENST00000543872 STX16-NPEPL1H3BU86 382 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 H7C0C1 242 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 GDF11O95390 407 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 P4HA1P13674 534 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 ATP5OP48047 213 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 GCNT1Q02742 428 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 CEP55Q53EZ4 464 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 MAVSQ7Z434 540 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 ADGRF2Q8IZF7 708 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 MYO1HQ8N1T3 1032 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 SPATA18Q8TC71 538 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 VPS50Q96JG6 964 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 PPP1R10Q96QC0 940 aaKnown RBP13.06□□□□□ -0.32
SMG8-202ENST00000543872 HNRNPABQ99729 332 aaKnown RBP13.06□□□□□ -0.32
SMG8-202ENST00000543872 TMEM79Q9BSE2 394 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 RNPEPQ9H4A4 650 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 KCND2Q9NZV8 630 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 ZHX2Q9Y6X8 837 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 NEMP1O14524 444 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 HLA-DRAP01903 254 aa13.06□□□□□ -0.32
SMG8-202ENST00000543872 EPHA3P29320 983 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms