RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 VPS50Q96JG6 964 aa13.33□□□□□ -0.28
TUBGCP2-210ENST00000543663 CNPY3Q9BT09 278 aa13.33□□□□□ -0.28
TUBGCP2-210ENST00000543663 CCDC134Q9H6E4 229 aa13.33□□□□□ -0.28
TUBGCP2-210ENST00000543663 IL1RAPL1Q9NZN1 696 aa13.33□□□□□ -0.28
TUBGCP2-210ENST00000543663 SLC17A7Q9P2U7 560 aa13.33□□□□□ -0.28
TUBGCP2-210ENST00000543663 SAC3D1A6NKF1 404 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 E5RJQ4 531 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 EDIL3O43854 480 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 SPAG6O75602 509 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 B3GAT3O94766 335 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 CLPTM1O96005 669 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 ERVK-10P10266 1014 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 FECHP22830 423 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 NOVP48745 357 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 ARHGDIAP52565 204 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 MRPS22P82650 360 aaKnown RBP13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 NRF1Q16656 503 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 EFHC1Q5JVL4 640 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 FKBP1CQ5VVH2 108 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 C9orf131Q5VYM1 1079 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 TTC33Q6PID6 262 aaPredicted RBP13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 TMEM161BQ8NDZ6 487 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 PBXIP1Q96AQ6 731 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 CGRRF1Q99675 332 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 SPATC1LQ9H0A9 340 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 SLC24A2Q9UI40 661 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 HES2Q9Y543 173 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 STMN1P16949 149 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 CYP2F1P24903 491 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 NCALDP61601 193 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 SLC34A1Q06495 639 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 DGKDQ16760 1214 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 AGKQ53H12 422 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 HYIQ5T013 277 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 KCNT2Q6UVM3 1135 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 MREGQ8N565 214 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 FITM2Q8N6M3 262 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 PPHLN1Q8NEY8 458 aaKnown RBP13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 ZNF560Q96MR9 790 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 KREMEN1Q96MU8 473 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 TRIM15Q9C019 465 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 RERGLQ9H628 205 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 CYP39A1Q9NYL5 469 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 TAGLN3Q9UI15 199 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 MAST2Q6P0Q8 1798 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 SUPT3HB4E1H0 165 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 ACAP1Q15027 740 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 OTUD3Q5T2D3 398 aaPredicted RBP13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 PDPK2PQ6A1A2 396 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 CLPTM1LQ96KA5 538 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 MAGEB5Q9BZ81 275 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 PRMT7Q9NVM4 692 aaPredicted RBP13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 CLIC5Q9NZA1 410 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 RPL22P35268 128 aaKnown RBP13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 GTF2A2P52657 109 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 TWF1Q12792 350 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 CD302Q8IX05 232 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 ASIC4Q96FT7 647 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 TMEM176AQ96HP8 235 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 CDRT15Q96T59 188 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 APOL5Q9BWW9 433 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 SHOC2Q9UQ13 582 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 BTAF1O14981 1849 aa13.32□□□□□ -0.28
TUBGCP2-210ENST00000543663 NHSQ6T4R5 1651 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 ERI2A8K979 691 aaKnown RBP13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 USP1O94782 785 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 TSPAN8P19075 237 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 NAMPTP43490 491 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 BST1Q10588 318 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 HSDL1Q3SXM5 330 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 FAM117BQ6P1L5 589 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 ALYREFQ86V81 257 aaKnown RBP13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 TNS4Q8IZW8 715 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 SPATA6LQ8N4H0 392 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 PCDH20Q8N6Y1 951 aaKnown RBP13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 PRPF18Q99633 342 aaKnown RBP13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 OSMRQ99650 979 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 PDGFCQ9NRA1 345 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 ERAP1Q9NZ08 941 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 AK5Q9Y6K8 562 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 B4GALT5O43286 388 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 FAM155BO75949 473 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 CHRM3P20309 590 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 GPRASP2Q96D09 838 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 SEPHS2Q99611 448 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 MTFR1LQ9H019 292 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 DDX28Q9NUL7 540 aaKnown RBP13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 MOSPD1Q9UJG1 213 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 BUD23O43709 281 aaKnown RBP13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 UBA1P22314 1058 aaKnown RBP13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 MAP3K7CLP57077 242 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 FAM71AQ8IYT1 594 aa13.31□□□□□ -0.28
TUBGCP2-210ENST00000543663 WDCPQ9H6R7 721 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms