RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ECSITQ9BQ95 431 aa14.21□□□□□ -0.13
VPS33A-208ENST00000543633 MECRQ9BV79 373 aa14.21□□□□□ -0.13
VPS33A-208ENST00000543633 ASCC2Q9H1I8 757 aaPredicted RBP14.21□□□□□ -0.13
VPS33A-208ENST00000543633 HOXC10Q9NYD6 342 aa14.21□□□□□ -0.13
VPS33A-208ENST00000543633 RNF181Q9P0P0 153 aa14.21□□□□□ -0.13
VPS33A-208ENST00000543633 TNFSF13BQ9Y275 285 aa14.21□□□□□ -0.13
VPS33A-208ENST00000543633 PCDHA11Q9Y5I1 949 aa14.21□□□□□ -0.13
VPS33A-208ENST00000543633 WASF2Q9Y6W5 498 aa14.21□□□□□ -0.13
VPS33A-208ENST00000543633 EME2A4GXA9 379 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 EIF4E1BA6NMX2 242 aaKnown RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 GLRA3O75311 464 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 DDNO94850 711 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 CSH1P0DML2 217 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 CSH2P0DML3 217 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 PIM1P11309 404 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 PDGFRAP16234 1089 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 ZFXP17010 805 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 RAP1GAPP47736 663 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 HIRAP54198 1017 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 PQLC3Q8N755 202 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SIGLEC10Q96LC7 697 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 NFKBIZQ9BYH8 718 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 IFT122Q9HBG6 1241 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 PCDH18Q9HCL0 1135 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SMYD2Q9NRG4 433 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SLC7A8Q9UHI5 535 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 ITGA11Q9UKX5 1188 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SSX2IPQ9Y2D8 614 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SPDYE16A6NNV3 312 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 CCNT2O60583 730 aaKnown RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 AVILO75366 819 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 LGR5O75473 907 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SETSIPP0DME0 302 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 MLNP12872 115 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 RBL1P28749 1068 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 HMGCS2P54868 508 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SH3BGRP55822 239 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 TNFAIP2Q03169 654 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 MTM1Q13496 603 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 KYAT1Q16773 422 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 C1orf228Q6PIY5 440 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 MTHFD1LQ6UB35 978 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 LCLAT1Q6UWP7 414 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 NDUFAF2Q8N183 169 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 C1orf127Q8N9H9 656 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 TWNKQ96RR1 684 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 CDT1Q9H211 546 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SMYD3Q9H7B4 428 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 PCMTD2Q9NV79 361 aa14.2□□□□□ -0.14
VPS33A-208ENST00000543633 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.2□□□□□ -0.14
VPS33A-208ENST00000543633 APRTP07741 180 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 LYNP07948 512 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 KRT19P08727 400 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 ALOX15P16050 662 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-208ENST00000543633 IL4RP24394 825 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 L1CAMP32004 1257 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 TCF7P36402 384 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-208ENST00000543633 CPOXP36551 454 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 CPA2P48052 419 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 NRLP54845 237 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 SEMA5AQ13591 1074 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 HIC1Q14526 733 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 C1orf146Q5VVC0 180 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 CES4AQ5XG92 561 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 ZNF534Q76KX8 674 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 NCAPG2Q86XI2 1143 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 CCNJLQ8IV13 435 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 PIWIL2Q8TC59 973 aaKnown RBP14.19□□□□□ -0.14
VPS33A-208ENST00000543633 FGD4Q96M96 766 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 GBP5Q96PP8 586 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 THTPAQ9BU02 230 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 ASB7Q9H672 318 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 PRDM16Q9HAZ2 1276 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 GBA2Q9HCG7 927 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-208ENST00000543633 DNAJC28Q9NX36 388 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 MOCS1Q9NZB8 636 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 CPSF2Q9P2I0 782 aaKnown RBP14.19□□□□□ -0.14
VPS33A-208ENST00000543633 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 ALDH1A2O94788 518 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 GRK2P25098 689 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 NR2C2P49116 596 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 SNX16P57768 344 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 IRX4P78413 519 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 ARHGAP8P85298 464 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 BTKQ06187 659 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 TUBB3Q13509 450 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 INSCQ1MX18 579 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 RABGAP1LQ5R372 815 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 THEMIS2Q5TEJ8 643 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 TRNP1Q6NT89 227 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 IZUMO2Q6UXV1 221 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 FAM183BPQ6ZVS7 135 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 ACAD11Q709F0 780 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 PLPPR4Q7Z2D5 763 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 CXorf38Q8TB03 319 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 DEPDC1BQ8WUY9 529 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 AZIN2Q96A70 460 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 ZBTB10Q96DT7 871 aa14.19□□□□□ -0.14
VPS33A-208ENST00000543633 SLC13A1Q9BZW2 595 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms