RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 SCARA5Q6ZMJ2 495 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 MMS22LQ6ZRQ5 1243 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 TMEM110Q86TL2 294 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 VSIG1Q86XK7 387 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 KATNAL2Q8IYT4 538 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 THEM5Q8N1Q8 247 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 ATAD1Q8NBU5 361 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 PJA1Q8NG27 643 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 WHAMMQ8TF30 809 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 GRK7Q8WTQ7 553 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 COG1Q8WTW3 980 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 ING5Q8WYH8 240 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 DNASE1L2Q92874 299 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 SMARCD2Q92925 531 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 CD101Q93033 1021 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 PSMG2Q969U7 264 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 MCRS1Q96EZ8 462 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 C11orf70Q9BRQ4 267 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 PARD6BQ9BYG5 372 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 ELOVL4Q9GZR5 314 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 RAB17Q9H0T7 212 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 SMYD3Q9H7B4 428 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 CDH9Q9ULB4 789 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 CA14Q9ULX7 337 aa12.01□□□□□ -0.49
COPS7A-217ENST00000543537 PTPRZ1P23471 2315 aaPredicted RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 FAM186AA6NE01 2351 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 KANSL1LA0AUZ9 987 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 H0Y858 1186 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 GABRDO14764 452 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 DDX3YO15523 660 aaKnown RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 SRGAP2O75044 1071 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 FBXO21O94952 628 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 FGF19O95750 216 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 OR4Q2P0C623 313 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 PCK1P35558 622 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 ALDH1A3P47895 512 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 RPL34P49207 117 aaKnown RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 DRG2P55039 364 aaKnown RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 MLLT6P55198 1093 aaPredicted RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 PSMC1P62191 440 aaKnown RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 MLF2Q15773 248 aaPredicted RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 LONRF2Q1L5Z9 754 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 SOWAHAQ2M3V2 549 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 SLC44A4Q53GD3 710 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 FAM78AQ5JUQ0 283 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 WSCD1Q658N2 575 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 TANGO2Q6ICL3 276 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 CEP128Q6ZU80 1094 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 MAP7D3Q8IWC1 876 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 ADGRF2Q8IZF7 708 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 HS6ST3Q8IZP7 471 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 TTC13Q8NBP0 860 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 SHKBP1Q8TBC3 707 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 SPPL2BQ8TCT7 592 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 CCHCR1Q8TD31 782 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 DEPDC1BQ8WUY9 529 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 E2F7Q96AV8 911 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 PGLYRP2Q96PD5 576 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 TMEM209Q96SK2 561 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 HNRNPABQ99729 332 aaKnown RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 KXD1Q9BQD3 176 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 SLC4A5Q9BY07 1137 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 ZFP14Q9HCL3 533 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 RRN3Q9NYV6 651 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 STIM2Q9P246 746 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 SIT1Q9Y3P8 196 aa12□□□□□ -0.49
COPS7A-217ENST00000543537 ZFHX2Q9C0A1 2572 aaPredicted RBP12□□□□□ -0.49
COPS7A-217ENST00000543537 M0QYV0 167 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 TJP3O95049 919 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 PTPN7P35236 360 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 MAGEA9P43362 315 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 FNTAP49354 379 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 CDH8P55286 799 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 PDCLQ13371 301 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 NNTQ13423 1086 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 BOLA3Q53S33 107 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 EFHC1Q5JVL4 640 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 PPP1R15BQ5SWA1 713 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 EMBQ6PCB8 327 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 GAREM2Q75VX8 874 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 HDXQ7Z353 690 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 DNAJB7Q7Z6W7 309 aaPredicted RBP11.99□□□□□ -0.49
COPS7A-217ENST00000543537 ITIH5Q86UX2 942 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 LRRTM3Q86VH5 581 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 GPIHBP1Q8IV16 184 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 TTC9BQ8N6N2 239 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 KCTD13Q8WZ19 329 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 TFAP2BQ92481 460 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 TSC1Q92574 1164 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 ATOH1Q92858 354 aaPredicted RBP11.99□□□□□ -0.49
COPS7A-217ENST00000543537 ZSWIM3Q96MP5 696 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 TBCBQ99426 244 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 NELL2Q99435 816 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 PKMYT1Q99640 499 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 ACBD6Q9BR61 282 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 CNPY3Q9BT09 278 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 PLA2G2FQ9BZM2 168 aa11.99□□□□□ -0.49
COPS7A-217ENST00000543537 VIPAS39Q9H9C1 493 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms