RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 TEKT4Q8WW24 435 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 HSPH1Q92598 858 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 CASP10Q92851 521 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 RNF34Q969K3 372 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 SERPINB11Q96P15 392 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 PEBP4Q96S96 227 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 CARD9Q9H257 536 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 PRDM12Q9H4Q4 367 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 IGFLR1Q9H665 355 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 CCSER2Q9H7U1 834 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 IL21Q9HBE4 155 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 DZANK1Q9NVP4 752 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 MARCH2Q9P0N8 246 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 SFMBT1Q9UHJ3 866 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 RASAL2Q9UJF2 1139 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 CDC23Q9UJX2 597 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 CHD7Q9P2D1 2997 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 CCDC195A0A1B0GUA6 201 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 LRRD1A4D1F6 860 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 MDM4O15151 490 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 ZNF185O15231 689 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 IRAK2O43187 625 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 MSI1O43347 362 aaKnown RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 TADA3O75528 432 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 TBX18O95935 607 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 POU2F2P09086 479 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 RARAP10276 462 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 PYGMP11217 842 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 CDC25CP30307 473 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 GTF2F1P35269 517 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDB1-221ENST00000543162 ATP5C1P36542 298 aaKnown RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 CETN2P41208 172 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 CXCR3P49682 368 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 TUBP50607 506 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 RBM10P98175 930 aaKnown RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 ZNF211Q13398 564 aaPredicted RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 ARL13BQ3SXY8 428 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 ATP13A4Q4VNC1 1196 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 TCEAL5Q5H9L2 206 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 ERMARDQ5T6L9 678 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 SEL1L2Q5TEA6 688 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 CCDC181Q5TID7 509 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 DCAF12L1Q5VU92 463 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 KLHDC10Q6PID8 442 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 CYP4V2Q6ZWL3 525 aaPredicted RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 TMEM150AQ86TG1 271 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 MIB1Q86YT6 1006 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 TMC8Q8IU68 726 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 CCDC50Q8IVM0 306 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 RCOR2Q8IZ40 523 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 CCDC185Q8N715 623 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 LEMD2Q8NC56 503 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 KCTD6Q8NC69 237 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 VN1R2Q8NFZ6 395 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 EXD1Q8NHP7 514 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 MRPS31Q92665 395 aaKnown RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 ACSF2Q96CM8 615 aaPredicted RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 RBM41Q96IZ5 413 aaKnown RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 CAPZA3Q96KX2 299 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 SNRNP25Q9BV90 132 aaKnown RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 LRRC3Q9BY71 257 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 PRKD2Q9BZL6 878 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 WDCPQ9H6R7 721 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 SFXN1Q9H9B4 322 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 PIDD1Q9HB75 910 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 WDR6Q9NNW5 1121 aaKnown RBP11.1□□□□□ -0.63
DDB1-221ENST00000543162 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDB1-221ENST00000543162 KLHL11Q9NVR0 708 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 HCFC1R1Q9NWW0 138 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 LMCD1Q9NZU5 365 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 DNMT3LQ9UJW3 386 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 TLR6Q9Y2C9 796 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 MRFAP1Q9Y605 127 aa11.1□□□□□ -0.63
DDB1-221ENST00000543162 SLC12A8A0AV02 714 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 C2orf78A6NCI8 922 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 PI4K2BG5E9Z4 385 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 COCHO43405 550 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 OAS1P00973 400 aaKnown RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 RHOP08100 348 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 SRGAP2BP0DMP2 458 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 SLC2A3P11169 496 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 CCR1P32246 355 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 ADRA1BP35368 520 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 PAFAH1B1P43034 410 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 KPNA1P52294 538 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 EPHA5P54756 1037 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 AIF1P55008 147 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 TBX4P57082 545 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 HYAL1Q12794 435 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 NNTQ13423 1086 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 EIF4EBP2Q13542 120 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 KCNC3Q14003 757 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 KRT81Q14533 505 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 PPP2R5DQ14738 602 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 TRIP4Q15650 581 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 WHAMMP3Q1A5X7 153 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 ZC3H12AQ5D1E8 599 aaKnown RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 EFHC2Q5JST6 749 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 BRMS1LQ5PSV4 323 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms